Gene : Eucgr.F00198 E. grandis v2.0
Defline:  (1 of 180) PF02458 - Transferase family (Transferase) Genomic Order:  127
Name:  ? Eucgr.F00198 Secondary Identifier:  ? PAC:32057499
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-361 Eucalyptus grandis pathologic  
Egrandis PWY-6040 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00198 0.5kb upstream 0.5kb upstream 1940 true Chr06: 2639257-2641196 Eucalyptus grandis
Eucgr.F00198 0.5kb upstream 0.5kb upstream 500 false Chr06: 2640697-2641196 Eucalyptus grandis
Eucgr.F00198 0.5kb downstream 0.5kb downstream 1940 true Chr06: 2638757-2640696 Eucalyptus grandis
Eucgr.F00198 0.5kb downstream 0.5kb downstream 500 false Chr06: 2638757-2639256 Eucalyptus grandis
Eucgr.F00198 1.0kb upstream 1.0kb upstream 2440 true Chr06: 2639257-2641696 Eucalyptus grandis
Eucgr.F00198 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2640697-2641696 Eucalyptus grandis
Eucgr.F00198 1.0kb downstream 1.0kb downstream 2440 true Chr06: 2638257-2640696 Eucalyptus grandis
Eucgr.F00198 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2638257-2639256 Eucalyptus grandis
Eucgr.F00198 2.0kb upstream 2.0kb upstream 3440 true Chr06: 2639257-2642696 Eucalyptus grandis
Eucgr.F00198 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2640697-2642696 Eucalyptus grandis
Eucgr.F00198 2.0kb downstream 2.0kb downstream 3440 true Chr06: 2637257-2640696 Eucalyptus grandis
Eucgr.F00198 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2637257-2639256 Eucalyptus grandis
Eucgr.F00198 5.0kb upstream 5.0kb upstream 6440 true Chr06: 2639257-2645696 Eucalyptus grandis
Eucgr.F00198 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2640697-2645696 Eucalyptus grandis
Eucgr.F00198 5.0kb downstream 5.0kb downstream 6440 true Chr06: 2634257-2640696 Eucalyptus grandis
Eucgr.F00198 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2634257-2639256 Eucalyptus grandis
Eucgr.F00198 10.0kb upstream 10.0kb upstream 11440 true Chr06: 2639257-2650696 Eucalyptus grandis
Eucgr.F00198 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2640697-2650696 Eucalyptus grandis
Eucgr.F00198 10.0kb downstream 10.0kb downstream 11440 true Chr06: 2629257-2640696 Eucalyptus grandis
Eucgr.F00198 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2629257-2639256 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.685637 0.0 2.16898    
cufflinks 0.659491 0.0 2.1232 Low  
cufflinks 0.610874 0.0 1.98845    
cufflinks 0.424653 0.0 1.45815 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain