Gene : Eucgr.F00200 E. grandis v2.0
Defline:  (1 of 180) PF02458 - Transferase family (Transferase) Genomic Order:  125
Name:  ? Eucgr.F00200 Secondary Identifier:  ? PAC:32055805
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-361 Eucalyptus grandis pathologic  
Egrandis PWY-6040 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00200 0.5kb upstream 0.5kb upstream 1895 true Chr06: 2608555-2610449 Eucalyptus grandis
Eucgr.F00200 0.5kb upstream 0.5kb upstream 500 false Chr06: 2609950-2610449 Eucalyptus grandis
Eucgr.F00200 0.5kb downstream 0.5kb downstream 1895 true Chr06: 2608055-2609949 Eucalyptus grandis
Eucgr.F00200 0.5kb downstream 0.5kb downstream 500 false Chr06: 2608055-2608554 Eucalyptus grandis
Eucgr.F00200 1.0kb upstream 1.0kb upstream 2395 true Chr06: 2608555-2610949 Eucalyptus grandis
Eucgr.F00200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2609950-2610949 Eucalyptus grandis
Eucgr.F00200 1.0kb downstream 1.0kb downstream 2395 true Chr06: 2607555-2609949 Eucalyptus grandis
Eucgr.F00200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2607555-2608554 Eucalyptus grandis
Eucgr.F00200 2.0kb upstream 2.0kb upstream 3395 true Chr06: 2608555-2611949 Eucalyptus grandis
Eucgr.F00200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2609950-2611949 Eucalyptus grandis
Eucgr.F00200 2.0kb downstream 2.0kb downstream 3395 true Chr06: 2606555-2609949 Eucalyptus grandis
Eucgr.F00200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2606555-2608554 Eucalyptus grandis
Eucgr.F00200 5.0kb upstream 5.0kb upstream 6395 true Chr06: 2608555-2614949 Eucalyptus grandis
Eucgr.F00200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2609950-2614949 Eucalyptus grandis
Eucgr.F00200 5.0kb downstream 5.0kb downstream 6395 true Chr06: 2603555-2609949 Eucalyptus grandis
Eucgr.F00200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2603555-2608554 Eucalyptus grandis
Eucgr.F00200 10.0kb upstream 10.0kb upstream 11395 true Chr06: 2608555-2619949 Eucalyptus grandis
Eucgr.F00200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2609950-2619949 Eucalyptus grandis
Eucgr.F00200 10.0kb downstream 10.0kb downstream 11395 true Chr06: 2598555-2609949 Eucalyptus grandis
Eucgr.F00200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2598555-2608554 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.187812 0.0 0.702279 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.10119 0.0 0.458225 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain