Gene : Eucgr.F00204 E. grandis v2.0
Defline:  (1 of 4) KOG2930 - SCF ubiquitin ligase, Rbx1 component Genomic Order:  122
Name:  ? Eucgr.F00204 Secondary Identifier:  ? PAC:32055718
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00204 0.5kb upstream 0.5kb upstream 7088 true Chr06: 2522256-2529343 Eucalyptus grandis
Eucgr.F00204 0.5kb upstream 0.5kb upstream 500 false Chr06: 2528844-2529343 Eucalyptus grandis
Eucgr.F00204 0.5kb downstream 0.5kb downstream 7088 true Chr06: 2521756-2528843 Eucalyptus grandis
Eucgr.F00204 0.5kb downstream 0.5kb downstream 500 false Chr06: 2521756-2522255 Eucalyptus grandis
Eucgr.F00204 1.0kb upstream 1.0kb upstream 7588 true Chr06: 2522256-2529843 Eucalyptus grandis
Eucgr.F00204 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2528844-2529843 Eucalyptus grandis
Eucgr.F00204 1.0kb downstream 1.0kb downstream 7588 true Chr06: 2521256-2528843 Eucalyptus grandis
Eucgr.F00204 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2521256-2522255 Eucalyptus grandis
Eucgr.F00204 2.0kb upstream 2.0kb upstream 8588 true Chr06: 2522256-2530843 Eucalyptus grandis
Eucgr.F00204 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2528844-2530843 Eucalyptus grandis
Eucgr.F00204 2.0kb downstream 2.0kb downstream 8588 true Chr06: 2520256-2528843 Eucalyptus grandis
Eucgr.F00204 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2520256-2522255 Eucalyptus grandis
Eucgr.F00204 5.0kb upstream 5.0kb upstream 11588 true Chr06: 2522256-2533843 Eucalyptus grandis
Eucgr.F00204 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2528844-2533843 Eucalyptus grandis
Eucgr.F00204 5.0kb downstream 5.0kb downstream 11588 true Chr06: 2517256-2528843 Eucalyptus grandis
Eucgr.F00204 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2517256-2522255 Eucalyptus grandis
Eucgr.F00204 10.0kb upstream 10.0kb upstream 16588 true Chr06: 2522256-2538843 Eucalyptus grandis
Eucgr.F00204 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2528844-2538843 Eucalyptus grandis
Eucgr.F00204 10.0kb downstream 10.0kb downstream 16588 true Chr06: 2512256-2528843 Eucalyptus grandis
Eucgr.F00204 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2512256-2522255 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061889 5270 Rosid View MSA
123751364 5271 Pentapetalae View MSA
122793070 5272 Eudicot View MSA
122041627 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351500 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.9279 0.0 153.892 High  
cufflinks 100.727 0.0 316.46 High  
cufflinks 81.8087 0.0 235.449 High  
cufflinks 98.7827 0.0 297.622 High  
cufflinks 195.486 0.0 715.97 High High
cufflinks 21.9756 0.0 59.4724   Low

0 Strain