Gene : Eucgr.F00159 E. grandis v2.0
Defline:  (1 of 2) PTHR34362:SF1 - WPP DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  163
Name:  ? Eucgr.F00159 Secondary Identifier:  ? PAC:32056532
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00159 0.5kb upstream 0.5kb upstream 1153 true Chr06: 3251003-3252155 Eucalyptus grandis
Eucgr.F00159 0.5kb upstream 0.5kb upstream 500 false Chr06: 3251656-3252155 Eucalyptus grandis
Eucgr.F00159 0.5kb downstream 0.5kb downstream 1153 true Chr06: 3250503-3251655 Eucalyptus grandis
Eucgr.F00159 0.5kb downstream 0.5kb downstream 500 false Chr06: 3250503-3251002 Eucalyptus grandis
Eucgr.F00159 1.0kb upstream 1.0kb upstream 1653 true Chr06: 3251003-3252655 Eucalyptus grandis
Eucgr.F00159 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3251656-3252655 Eucalyptus grandis
Eucgr.F00159 1.0kb downstream 1.0kb downstream 1653 true Chr06: 3250003-3251655 Eucalyptus grandis
Eucgr.F00159 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3250003-3251002 Eucalyptus grandis
Eucgr.F00159 2.0kb upstream 2.0kb upstream 2653 true Chr06: 3251003-3253655 Eucalyptus grandis
Eucgr.F00159 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3251656-3253655 Eucalyptus grandis
Eucgr.F00159 2.0kb downstream 2.0kb downstream 2653 true Chr06: 3249003-3251655 Eucalyptus grandis
Eucgr.F00159 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3249003-3251002 Eucalyptus grandis
Eucgr.F00159 5.0kb upstream 5.0kb upstream 5653 true Chr06: 3251003-3256655 Eucalyptus grandis
Eucgr.F00159 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3251656-3256655 Eucalyptus grandis
Eucgr.F00159 5.0kb downstream 5.0kb downstream 5653 true Chr06: 3246003-3251655 Eucalyptus grandis
Eucgr.F00159 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3246003-3251002 Eucalyptus grandis
Eucgr.F00159 10.0kb upstream 10.0kb upstream 10653 true Chr06: 3251003-3261655 Eucalyptus grandis
Eucgr.F00159 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3251656-3261655 Eucalyptus grandis
Eucgr.F00159 10.0kb downstream 10.0kb downstream 10653 true Chr06: 3241003-3251655 Eucalyptus grandis
Eucgr.F00159 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3241003-3251002 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061872 5270 Rosid View MSA
123739220 5271 Pentapetalae View MSA
122792231 5272 Eudicot View MSA
122045089 5273 Angiosperm View MSA
121310396 5274 Embryophyte View MSA
123347890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.613949 0.0 2.29572    
cufflinks 13.2498 0.0 35.011   High
cufflinks 0.710993 0.0 2.66518    
cufflinks 1.50764 0.0 5.17687    
cufflinks 7.45735 0.0 20.831    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain