Gene : Eucgr.F00183 E. grandis v2.0
Defline:  (1 of 2) PTHR12226 - MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED Genomic Order:  142
Name:  ? Eucgr.F00183 Secondary Identifier:  ? PAC:32053666
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00183 0.5kb upstream 0.5kb upstream 5221 true Chr06: 2768252-2773472 Eucalyptus grandis
Eucgr.F00183 0.5kb upstream 0.5kb upstream 500 false Chr06: 2768252-2768751 Eucalyptus grandis
Eucgr.F00183 0.5kb downstream 0.5kb downstream 5221 true Chr06: 2768752-2773972 Eucalyptus grandis
Eucgr.F00183 0.5kb downstream 0.5kb downstream 500 false Chr06: 2773473-2773972 Eucalyptus grandis
Eucgr.F00183 1.0kb upstream 1.0kb upstream 5721 true Chr06: 2767752-2773472 Eucalyptus grandis
Eucgr.F00183 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2767752-2768751 Eucalyptus grandis
Eucgr.F00183 1.0kb downstream 1.0kb downstream 5721 true Chr06: 2768752-2774472 Eucalyptus grandis
Eucgr.F00183 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2773473-2774472 Eucalyptus grandis
Eucgr.F00183 2.0kb upstream 2.0kb upstream 6721 true Chr06: 2766752-2773472 Eucalyptus grandis
Eucgr.F00183 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2766752-2768751 Eucalyptus grandis
Eucgr.F00183 2.0kb downstream 2.0kb downstream 6721 true Chr06: 2768752-2775472 Eucalyptus grandis
Eucgr.F00183 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2773473-2775472 Eucalyptus grandis
Eucgr.F00183 5.0kb upstream 5.0kb upstream 9721 true Chr06: 2763752-2773472 Eucalyptus grandis
Eucgr.F00183 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2763752-2768751 Eucalyptus grandis
Eucgr.F00183 5.0kb downstream 5.0kb downstream 9721 true Chr06: 2768752-2778472 Eucalyptus grandis
Eucgr.F00183 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2773473-2778472 Eucalyptus grandis
Eucgr.F00183 10.0kb upstream 10.0kb upstream 14721 true Chr06: 2758752-2773472 Eucalyptus grandis
Eucgr.F00183 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2758752-2768751 Eucalyptus grandis
Eucgr.F00183 10.0kb downstream 10.0kb downstream 14721 true Chr06: 2768752-2783472 Eucalyptus grandis
Eucgr.F00183 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2773473-2783472 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026177 5273 Angiosperm View MSA
124060933 5270 Rosid View MSA
123748760 5271 Pentapetalae View MSA
122789480 5272 Eudicot View MSA
121343943 5274 Embryophyte View MSA
123424211 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.5639 0.0 43.8038    
cufflinks 27.7123 0.0 62.2659    
cufflinks 17.5188 0.0 48.4578    
cufflinks 28.5427 0.0 85.1937    
cufflinks 29.4965 0.0 66.2103   High
cufflinks 15.2104 0.0 35.1604   Low

0 Strain