Gene : Eucgr.F00119 E. grandis v2.0
Defline:  (1 of 2) PF12907 - Zinc-binding (zf-met2) Genomic Order:  200
Name:  ? Eucgr.F00119 Secondary Identifier:  ? PAC:32056698
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00119 0.5kb upstream 0.5kb upstream 3734 true Chr06: 3549299-3553032 Eucalyptus grandis
Eucgr.F00119 0.5kb upstream 0.5kb upstream 500 false Chr06: 3549299-3549798 Eucalyptus grandis
Eucgr.F00119 0.5kb downstream 0.5kb downstream 3734 true Chr06: 3549799-3553532 Eucalyptus grandis
Eucgr.F00119 0.5kb downstream 0.5kb downstream 500 false Chr06: 3553033-3553532 Eucalyptus grandis
Eucgr.F00119 1.0kb upstream 1.0kb upstream 4234 true Chr06: 3548799-3553032 Eucalyptus grandis
Eucgr.F00119 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3548799-3549798 Eucalyptus grandis
Eucgr.F00119 1.0kb downstream 1.0kb downstream 4234 true Chr06: 3549799-3554032 Eucalyptus grandis
Eucgr.F00119 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3553033-3554032 Eucalyptus grandis
Eucgr.F00119 2.0kb upstream 2.0kb upstream 5234 true Chr06: 3547799-3553032 Eucalyptus grandis
Eucgr.F00119 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3547799-3549798 Eucalyptus grandis
Eucgr.F00119 2.0kb downstream 2.0kb downstream 5234 true Chr06: 3549799-3555032 Eucalyptus grandis
Eucgr.F00119 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3553033-3555032 Eucalyptus grandis
Eucgr.F00119 5.0kb upstream 5.0kb upstream 8234 true Chr06: 3544799-3553032 Eucalyptus grandis
Eucgr.F00119 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3544799-3549798 Eucalyptus grandis
Eucgr.F00119 5.0kb downstream 5.0kb downstream 8234 true Chr06: 3549799-3558032 Eucalyptus grandis
Eucgr.F00119 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3553033-3558032 Eucalyptus grandis
Eucgr.F00119 10.0kb upstream 10.0kb upstream 13234 true Chr06: 3539799-3553032 Eucalyptus grandis
Eucgr.F00119 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3539799-3549798 Eucalyptus grandis
Eucgr.F00119 10.0kb downstream 10.0kb downstream 13234 true Chr06: 3549799-3563032 Eucalyptus grandis
Eucgr.F00119 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3553033-3563032 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066852 5270 Rosid View MSA
123751262 5271 Pentapetalae View MSA
122792362 5272 Eudicot View MSA
122042016 5273 Angiosperm View MSA
121349419 5274 Embryophyte View MSA
123425398 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 318.74 0.0 754.314 High  
cufflinks 377.951 0.0 903.734 High  
cufflinks 350.465 0.0 833.173 High  
cufflinks 535.9 0.0 1326.1 High  
cufflinks 660.083 0.0 1679.79 High High
cufflinks 228.695 0.0 527.967 High Low

0 Strain