Gene : Eucgr.F00143 E. grandis v2.0
Defline:  (1 of 3) PTHR10177:SF100 - CYCLIN-A3-2-RELATED Genomic Order:  178
Name:  ? Eucgr.F00143 Secondary Identifier:  ? PAC:32055031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00143 0.5kb upstream 0.5kb upstream 3045 true Chr06: 3398293-3401337 Eucalyptus grandis
Eucgr.F00143 0.5kb upstream 0.5kb upstream 500 false Chr06: 3400838-3401337 Eucalyptus grandis
Eucgr.F00143 0.5kb downstream 0.5kb downstream 3045 true Chr06: 3397793-3400837 Eucalyptus grandis
Eucgr.F00143 0.5kb downstream 0.5kb downstream 500 false Chr06: 3397793-3398292 Eucalyptus grandis
Eucgr.F00143 1.0kb upstream 1.0kb upstream 3545 true Chr06: 3398293-3401837 Eucalyptus grandis
Eucgr.F00143 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3400838-3401837 Eucalyptus grandis
Eucgr.F00143 1.0kb downstream 1.0kb downstream 3545 true Chr06: 3397293-3400837 Eucalyptus grandis
Eucgr.F00143 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3397293-3398292 Eucalyptus grandis
Eucgr.F00143 2.0kb upstream 2.0kb upstream 4545 true Chr06: 3398293-3402837 Eucalyptus grandis
Eucgr.F00143 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3400838-3402837 Eucalyptus grandis
Eucgr.F00143 2.0kb downstream 2.0kb downstream 4545 true Chr06: 3396293-3400837 Eucalyptus grandis
Eucgr.F00143 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3396293-3398292 Eucalyptus grandis
Eucgr.F00143 5.0kb upstream 5.0kb upstream 7545 true Chr06: 3398293-3405837 Eucalyptus grandis
Eucgr.F00143 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3400838-3405837 Eucalyptus grandis
Eucgr.F00143 5.0kb downstream 5.0kb downstream 7545 true Chr06: 3393293-3400837 Eucalyptus grandis
Eucgr.F00143 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3393293-3398292 Eucalyptus grandis
Eucgr.F00143 10.0kb upstream 10.0kb upstream 12545 true Chr06: 3398293-3410837 Eucalyptus grandis
Eucgr.F00143 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3400838-3410837 Eucalyptus grandis
Eucgr.F00143 10.0kb downstream 10.0kb downstream 12545 true Chr06: 3388293-3400837 Eucalyptus grandis
Eucgr.F00143 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3388293-3398292 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066944 5270 Rosid View MSA
123741771 5271 Pentapetalae View MSA
122792448 5272 Eudicot View MSA
122043668 5273 Angiosperm View MSA
123429011 5275 Viridiplantae View MSA
121349586 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.32111 0.0 8.48121    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.79118 0.0 4.86893    
cufflinks 0.120657 0.0 0.454605 Low Low
cufflinks 1.85733 0.0 5.01589    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain