Gene : Eucgr.F00978 E. grandis v2.0
Defline:  (1 of 3) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Genomic Order:  863
Name:  ? Eucgr.F00978 Secondary Identifier:  ? PAC:32056407
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00978 0.5kb upstream 0.5kb upstream 3601 true Chr06: 13985061-13988661 Eucalyptus grandis
Eucgr.F00978 0.5kb upstream 0.5kb upstream 500 false Chr06: 13985061-13985560 Eucalyptus grandis
Eucgr.F00978 0.5kb downstream 0.5kb downstream 3601 true Chr06: 13985561-13989161 Eucalyptus grandis
Eucgr.F00978 0.5kb downstream 0.5kb downstream 500 false Chr06: 13988662-13989161 Eucalyptus grandis
Eucgr.F00978 1.0kb upstream 1.0kb upstream 4101 true Chr06: 13984561-13988661 Eucalyptus grandis
Eucgr.F00978 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13984561-13985560 Eucalyptus grandis
Eucgr.F00978 1.0kb downstream 1.0kb downstream 4101 true Chr06: 13985561-13989661 Eucalyptus grandis
Eucgr.F00978 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13988662-13989661 Eucalyptus grandis
Eucgr.F00978 2.0kb upstream 2.0kb upstream 5101 true Chr06: 13983561-13988661 Eucalyptus grandis
Eucgr.F00978 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13983561-13985560 Eucalyptus grandis
Eucgr.F00978 2.0kb downstream 2.0kb downstream 5101 true Chr06: 13985561-13990661 Eucalyptus grandis
Eucgr.F00978 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13988662-13990661 Eucalyptus grandis
Eucgr.F00978 5.0kb upstream 5.0kb upstream 8101 true Chr06: 13980561-13988661 Eucalyptus grandis
Eucgr.F00978 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13980561-13985560 Eucalyptus grandis
Eucgr.F00978 5.0kb downstream 5.0kb downstream 8101 true Chr06: 13985561-13993661 Eucalyptus grandis
Eucgr.F00978 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13988662-13993661 Eucalyptus grandis
Eucgr.F00978 10.0kb upstream 10.0kb upstream 13101 true Chr06: 13975561-13988661 Eucalyptus grandis
Eucgr.F00978 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13975561-13985560 Eucalyptus grandis
Eucgr.F00978 10.0kb downstream 10.0kb downstream 13101 true Chr06: 13985561-13998661 Eucalyptus grandis
Eucgr.F00978 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13988662-13998661 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061574 5270 Rosid View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.366 0.0 55.9459    
cufflinks 17.7344 0.0 49.8599    
cufflinks 17.627 0.0 53.5209    
cufflinks 26.0748 0.0 64.1118   High
cufflinks 22.4063 0.0 53.4173    
cufflinks 14.329 0.0 34.2044   Low

0 Strain