Gene : Eucgr.F00980 E. grandis v2.0
Defline:  (1 of 3) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Genomic Order:  865
Name:  ? Eucgr.F00980 Secondary Identifier:  ? PAC:32057656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00980 0.5kb upstream 0.5kb upstream 3649 true Chr06: 13995743-13999391 Eucalyptus grandis
Eucgr.F00980 0.5kb upstream 0.5kb upstream 500 false Chr06: 13995743-13996242 Eucalyptus grandis
Eucgr.F00980 0.5kb downstream 0.5kb downstream 3649 true Chr06: 13996243-13999891 Eucalyptus grandis
Eucgr.F00980 0.5kb downstream 0.5kb downstream 500 false Chr06: 13999392-13999891 Eucalyptus grandis
Eucgr.F00980 1.0kb upstream 1.0kb upstream 4149 true Chr06: 13995243-13999391 Eucalyptus grandis
Eucgr.F00980 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13995243-13996242 Eucalyptus grandis
Eucgr.F00980 1.0kb downstream 1.0kb downstream 4149 true Chr06: 13996243-14000391 Eucalyptus grandis
Eucgr.F00980 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13999392-14000391 Eucalyptus grandis
Eucgr.F00980 2.0kb upstream 2.0kb upstream 5149 true Chr06: 13994243-13999391 Eucalyptus grandis
Eucgr.F00980 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13994243-13996242 Eucalyptus grandis
Eucgr.F00980 2.0kb downstream 2.0kb downstream 5149 true Chr06: 13996243-14001391 Eucalyptus grandis
Eucgr.F00980 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13999392-14001391 Eucalyptus grandis
Eucgr.F00980 5.0kb upstream 5.0kb upstream 8149 true Chr06: 13991243-13999391 Eucalyptus grandis
Eucgr.F00980 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13991243-13996242 Eucalyptus grandis
Eucgr.F00980 5.0kb downstream 5.0kb downstream 8149 true Chr06: 13996243-14004391 Eucalyptus grandis
Eucgr.F00980 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13999392-14004391 Eucalyptus grandis
Eucgr.F00980 10.0kb upstream 10.0kb upstream 13149 true Chr06: 13986243-13999391 Eucalyptus grandis
Eucgr.F00980 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13986243-13996242 Eucalyptus grandis
Eucgr.F00980 10.0kb downstream 10.0kb downstream 13149 true Chr06: 13996243-14009391 Eucalyptus grandis
Eucgr.F00980 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13999392-14009391 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061574 5270 Rosid View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6576 0.0 40.1781    
cufflinks 10.1717 0.0 25.9038    
cufflinks 10.4985 0.0 30.9751    
cufflinks 12.9922 0.0 41.6343    
cufflinks 7.07781 0.0 23.4114    
cufflinks 2.22046 0.0 7.22649   Low

0 Strain