Gene : Eucgr.F00973 E. grandis v2.0
Defline:  (1 of 2) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Genomic Order:  859
Name:  ? Eucgr.F00973 Secondary Identifier:  ? PAC:32055625
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00973 0.5kb upstream 0.5kb upstream 8538 true Chr06: 13935451-13943988 Eucalyptus grandis
Eucgr.F00973 0.5kb upstream 0.5kb upstream 500 false Chr06: 13935451-13935950 Eucalyptus grandis
Eucgr.F00973 0.5kb downstream 0.5kb downstream 8538 true Chr06: 13935951-13944488 Eucalyptus grandis
Eucgr.F00973 0.5kb downstream 0.5kb downstream 500 false Chr06: 13943989-13944488 Eucalyptus grandis
Eucgr.F00973 1.0kb upstream 1.0kb upstream 9038 true Chr06: 13934951-13943988 Eucalyptus grandis
Eucgr.F00973 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13934951-13935950 Eucalyptus grandis
Eucgr.F00973 1.0kb downstream 1.0kb downstream 9038 true Chr06: 13935951-13944988 Eucalyptus grandis
Eucgr.F00973 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13943989-13944988 Eucalyptus grandis
Eucgr.F00973 2.0kb upstream 2.0kb upstream 10038 true Chr06: 13933951-13943988 Eucalyptus grandis
Eucgr.F00973 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13933951-13935950 Eucalyptus grandis
Eucgr.F00973 2.0kb downstream 2.0kb downstream 10038 true Chr06: 13935951-13945988 Eucalyptus grandis
Eucgr.F00973 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13943989-13945988 Eucalyptus grandis
Eucgr.F00973 5.0kb upstream 5.0kb upstream 13038 true Chr06: 13930951-13943988 Eucalyptus grandis
Eucgr.F00973 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13930951-13935950 Eucalyptus grandis
Eucgr.F00973 5.0kb downstream 5.0kb downstream 13038 true Chr06: 13935951-13948988 Eucalyptus grandis
Eucgr.F00973 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13943989-13948988 Eucalyptus grandis
Eucgr.F00973 10.0kb upstream 10.0kb upstream 18038 true Chr06: 13925951-13943988 Eucalyptus grandis
Eucgr.F00973 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13925951-13935950 Eucalyptus grandis
Eucgr.F00973 10.0kb downstream 10.0kb downstream 18038 true Chr06: 13935951-13953988 Eucalyptus grandis
Eucgr.F00973 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13943989-13953988 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064798 5270 Rosid View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4175 0.0 24.2605    
cufflinks 26.0112 0.0 67.154    
cufflinks 12.9475 0.0 37.1047    
cufflinks 49.1593 0.0 131.916 High High
cufflinks 18.4021 0.0 45.9864    
cufflinks 4.36163 0.0 10.9405   Low

0 Strain