Gene : Eucgr.F00764 E. grandis v2.0
Defline:  (1 of 2) PTHR13312 - HIV-INDUCED PROTEIN-7-LIKE PROTEASE Genomic Order:  717
Name:  ? Eucgr.F00764 Secondary Identifier:  ? PAC:32057413
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00764 0.5kb upstream 0.5kb upstream 5191 true Chr06: 10920796-10925986 Eucalyptus grandis
Eucgr.F00764 0.5kb upstream 0.5kb upstream 500 false Chr06: 10925487-10925986 Eucalyptus grandis
Eucgr.F00764 0.5kb downstream 0.5kb downstream 5191 true Chr06: 10920296-10925486 Eucalyptus grandis
Eucgr.F00764 0.5kb downstream 0.5kb downstream 500 false Chr06: 10920296-10920795 Eucalyptus grandis
Eucgr.F00764 1.0kb upstream 1.0kb upstream 5691 true Chr06: 10920796-10926486 Eucalyptus grandis
Eucgr.F00764 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10925487-10926486 Eucalyptus grandis
Eucgr.F00764 1.0kb downstream 1.0kb downstream 5691 true Chr06: 10919796-10925486 Eucalyptus grandis
Eucgr.F00764 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10919796-10920795 Eucalyptus grandis
Eucgr.F00764 2.0kb upstream 2.0kb upstream 6691 true Chr06: 10920796-10927486 Eucalyptus grandis
Eucgr.F00764 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10925487-10927486 Eucalyptus grandis
Eucgr.F00764 2.0kb downstream 2.0kb downstream 6691 true Chr06: 10918796-10925486 Eucalyptus grandis
Eucgr.F00764 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10918796-10920795 Eucalyptus grandis
Eucgr.F00764 5.0kb upstream 5.0kb upstream 9691 true Chr06: 10920796-10930486 Eucalyptus grandis
Eucgr.F00764 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10925487-10930486 Eucalyptus grandis
Eucgr.F00764 5.0kb downstream 5.0kb downstream 9691 true Chr06: 10915796-10925486 Eucalyptus grandis
Eucgr.F00764 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10915796-10920795 Eucalyptus grandis
Eucgr.F00764 10.0kb upstream 10.0kb upstream 14691 true Chr06: 10920796-10935486 Eucalyptus grandis
Eucgr.F00764 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10925487-10935486 Eucalyptus grandis
Eucgr.F00764 10.0kb downstream 10.0kb downstream 14691 true Chr06: 10910796-10925486 Eucalyptus grandis
Eucgr.F00764 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10910796-10920795 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061628 5270 Rosid View MSA
123738549 5271 Pentapetalae View MSA
122788500 5272 Eudicot View MSA
122046032 5273 Angiosperm View MSA
121345268 5274 Embryophyte View MSA
123424822 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.3695 0.0 77.7138   Low
cufflinks 48.1748 0.0 149.721 High  
cufflinks 28.155 0.0 87.5999 High  
cufflinks 48.9508 0.0 164.445 High  
cufflinks 66.4319 0.0 163.459 High High
cufflinks 43.5349 0.0 132.87 High  

0 Strain