Gene : Eucgr.F00752 E. grandis v2.0
Defline:  (1 of 1) PTHR12001//PTHR12001:SF57 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE Genomic Order:  707
Name:  ? Eucgr.F00752 Secondary Identifier:  ? PAC:32057811
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00752 0.5kb upstream 0.5kb upstream 1739 true Chr06: 10745590-10747328 Eucalyptus grandis
Eucgr.F00752 0.5kb upstream 0.5kb upstream 500 false Chr06: 10745590-10746089 Eucalyptus grandis
Eucgr.F00752 0.5kb downstream 0.5kb downstream 1739 true Chr06: 10746090-10747828 Eucalyptus grandis
Eucgr.F00752 0.5kb downstream 0.5kb downstream 500 false Chr06: 10747329-10747828 Eucalyptus grandis
Eucgr.F00752 1.0kb upstream 1.0kb upstream 2239 true Chr06: 10745090-10747328 Eucalyptus grandis
Eucgr.F00752 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10745090-10746089 Eucalyptus grandis
Eucgr.F00752 1.0kb downstream 1.0kb downstream 2239 true Chr06: 10746090-10748328 Eucalyptus grandis
Eucgr.F00752 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10747329-10748328 Eucalyptus grandis
Eucgr.F00752 2.0kb upstream 2.0kb upstream 3239 true Chr06: 10744090-10747328 Eucalyptus grandis
Eucgr.F00752 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10744090-10746089 Eucalyptus grandis
Eucgr.F00752 2.0kb downstream 2.0kb downstream 3239 true Chr06: 10746090-10749328 Eucalyptus grandis
Eucgr.F00752 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10747329-10749328 Eucalyptus grandis
Eucgr.F00752 5.0kb upstream 5.0kb upstream 6239 true Chr06: 10741090-10747328 Eucalyptus grandis
Eucgr.F00752 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10741090-10746089 Eucalyptus grandis
Eucgr.F00752 5.0kb downstream 5.0kb downstream 6239 true Chr06: 10746090-10752328 Eucalyptus grandis
Eucgr.F00752 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10747329-10752328 Eucalyptus grandis
Eucgr.F00752 10.0kb upstream 10.0kb upstream 11239 true Chr06: 10736090-10747328 Eucalyptus grandis
Eucgr.F00752 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10736090-10746089 Eucalyptus grandis
Eucgr.F00752 10.0kb downstream 10.0kb downstream 11239 true Chr06: 10746090-10757328 Eucalyptus grandis
Eucgr.F00752 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10747329-10757328 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792206 5273 Angiosperm View MSA
124070417 5270 Rosid View MSA
123742390 5271 Pentapetalae View MSA
122796955 5272 Eudicot View MSA
121063452 5274 Embryophyte View MSA
123103200 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 110.194 0.0 251.088 High  
cufflinks 1.2372 0.0 3.66119   Low
cufflinks 99.5687 0.0 224.185 High  
cufflinks 3.27841 0.0 8.77673    
cufflinks 2.47018 0.0 6.77385    
cufflinks 91.7105 0.0 208.151 High  

0 Strain