Gene : Eucgr.F00723 E. grandis v2.0
Defline:  (1 of 2) KOG3157 - Proline synthetase co-transcribed protein Genomic Order:  686
Name:  ? Eucgr.F00723 Secondary Identifier:  ? PAC:32053559
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00723 0.5kb upstream 0.5kb upstream 4342 true Chr06: 10394354-10398695 Eucalyptus grandis
Eucgr.F00723 0.5kb upstream 0.5kb upstream 500 false Chr06: 10398196-10398695 Eucalyptus grandis
Eucgr.F00723 0.5kb downstream 0.5kb downstream 4342 true Chr06: 10393854-10398195 Eucalyptus grandis
Eucgr.F00723 0.5kb downstream 0.5kb downstream 500 false Chr06: 10393854-10394353 Eucalyptus grandis
Eucgr.F00723 1.0kb upstream 1.0kb upstream 4842 true Chr06: 10394354-10399195 Eucalyptus grandis
Eucgr.F00723 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10398196-10399195 Eucalyptus grandis
Eucgr.F00723 1.0kb downstream 1.0kb downstream 4842 true Chr06: 10393354-10398195 Eucalyptus grandis
Eucgr.F00723 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10393354-10394353 Eucalyptus grandis
Eucgr.F00723 2.0kb upstream 2.0kb upstream 5842 true Chr06: 10394354-10400195 Eucalyptus grandis
Eucgr.F00723 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10398196-10400195 Eucalyptus grandis
Eucgr.F00723 2.0kb downstream 2.0kb downstream 5842 true Chr06: 10392354-10398195 Eucalyptus grandis
Eucgr.F00723 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10392354-10394353 Eucalyptus grandis
Eucgr.F00723 5.0kb upstream 5.0kb upstream 8842 true Chr06: 10394354-10403195 Eucalyptus grandis
Eucgr.F00723 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10398196-10403195 Eucalyptus grandis
Eucgr.F00723 5.0kb downstream 5.0kb downstream 8842 true Chr06: 10389354-10398195 Eucalyptus grandis
Eucgr.F00723 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10389354-10394353 Eucalyptus grandis
Eucgr.F00723 10.0kb upstream 10.0kb upstream 13842 true Chr06: 10394354-10408195 Eucalyptus grandis
Eucgr.F00723 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10398196-10408195 Eucalyptus grandis
Eucgr.F00723 10.0kb downstream 10.0kb downstream 13842 true Chr06: 10384354-10398195 Eucalyptus grandis
Eucgr.F00723 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10384354-10394353 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066747 5270 Rosid View MSA
123741353 5271 Pentapetalae View MSA
122795077 5272 Eudicot View MSA
122042316 5273 Angiosperm View MSA
121344237 5274 Embryophyte View MSA
123424021 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.53815 0.0 25.8316    
cufflinks 12.3032 0.0 34.9964    
cufflinks 8.06195 0.0 27.0084    
cufflinks 15.3121 0.0 49.7616    
cufflinks 9.11637 0.0 24.3039    
cufflinks 36.4658 0.0 103.464 High High

0 Strain