Gene : Eucgr.F00716 E. grandis v2.0
Defline:  (1 of 49) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  680
Name:  ? Eucgr.F00716 Secondary Identifier:  ? PAC:32052698
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00716 0.5kb upstream 0.5kb upstream 1270 true Chr06: 10335777-10337046 Eucalyptus grandis
Eucgr.F00716 0.5kb upstream 0.5kb upstream 500 false Chr06: 10335777-10336276 Eucalyptus grandis
Eucgr.F00716 0.5kb downstream 0.5kb downstream 1270 true Chr06: 10336277-10337546 Eucalyptus grandis
Eucgr.F00716 0.5kb downstream 0.5kb downstream 500 false Chr06: 10337047-10337546 Eucalyptus grandis
Eucgr.F00716 1.0kb upstream 1.0kb upstream 1770 true Chr06: 10335277-10337046 Eucalyptus grandis
Eucgr.F00716 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10335277-10336276 Eucalyptus grandis
Eucgr.F00716 1.0kb downstream 1.0kb downstream 1770 true Chr06: 10336277-10338046 Eucalyptus grandis
Eucgr.F00716 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10337047-10338046 Eucalyptus grandis
Eucgr.F00716 2.0kb upstream 2.0kb upstream 2770 true Chr06: 10334277-10337046 Eucalyptus grandis
Eucgr.F00716 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10334277-10336276 Eucalyptus grandis
Eucgr.F00716 2.0kb downstream 2.0kb downstream 2770 true Chr06: 10336277-10339046 Eucalyptus grandis
Eucgr.F00716 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10337047-10339046 Eucalyptus grandis
Eucgr.F00716 5.0kb upstream 5.0kb upstream 5770 true Chr06: 10331277-10337046 Eucalyptus grandis
Eucgr.F00716 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10331277-10336276 Eucalyptus grandis
Eucgr.F00716 5.0kb downstream 5.0kb downstream 5770 true Chr06: 10336277-10342046 Eucalyptus grandis
Eucgr.F00716 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10337047-10342046 Eucalyptus grandis
Eucgr.F00716 10.0kb upstream 10.0kb upstream 10770 true Chr06: 10326277-10337046 Eucalyptus grandis
Eucgr.F00716 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10326277-10336276 Eucalyptus grandis
Eucgr.F00716 10.0kb downstream 10.0kb downstream 10770 true Chr06: 10336277-10347046 Eucalyptus grandis
Eucgr.F00716 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10337047-10347046 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070125 5270 Rosid View MSA
123742485 5271 Pentapetalae View MSA
122795207 5272 Eudicot View MSA
122049562 5273 Angiosperm View MSA
121311476 5274 Embryophyte View MSA
123348769 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.723559 0.0 2.46514    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.740727 0.0 2.53007    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 15.6903 0.0 38.3425   High

0 Strain