Gene : Eucgr.F00738 E. grandis v2.0
Defline:  (1 of 1) KOG1847 - mRNA splicing factor Genomic Order:  693
Name:  ? Eucgr.F00738 Secondary Identifier:  ? PAC:32054631
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00738 0.5kb upstream 0.5kb upstream 3861 true Chr06: 10599107-10602967 Eucalyptus grandis
Eucgr.F00738 0.5kb upstream 0.5kb upstream 500 false Chr06: 10599107-10599606 Eucalyptus grandis
Eucgr.F00738 0.5kb downstream 0.5kb downstream 3861 true Chr06: 10599607-10603467 Eucalyptus grandis
Eucgr.F00738 0.5kb downstream 0.5kb downstream 500 false Chr06: 10602968-10603467 Eucalyptus grandis
Eucgr.F00738 1.0kb upstream 1.0kb upstream 4361 true Chr06: 10598607-10602967 Eucalyptus grandis
Eucgr.F00738 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10598607-10599606 Eucalyptus grandis
Eucgr.F00738 1.0kb downstream 1.0kb downstream 4361 true Chr06: 10599607-10603967 Eucalyptus grandis
Eucgr.F00738 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10602968-10603967 Eucalyptus grandis
Eucgr.F00738 2.0kb upstream 2.0kb upstream 5361 true Chr06: 10597607-10602967 Eucalyptus grandis
Eucgr.F00738 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10597607-10599606 Eucalyptus grandis
Eucgr.F00738 2.0kb downstream 2.0kb downstream 5361 true Chr06: 10599607-10604967 Eucalyptus grandis
Eucgr.F00738 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10602968-10604967 Eucalyptus grandis
Eucgr.F00738 5.0kb upstream 5.0kb upstream 8361 true Chr06: 10594607-10602967 Eucalyptus grandis
Eucgr.F00738 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10594607-10599606 Eucalyptus grandis
Eucgr.F00738 5.0kb downstream 5.0kb downstream 8361 true Chr06: 10599607-10607967 Eucalyptus grandis
Eucgr.F00738 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10602968-10607967 Eucalyptus grandis
Eucgr.F00738 10.0kb upstream 10.0kb upstream 13361 true Chr06: 10589607-10602967 Eucalyptus grandis
Eucgr.F00738 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10589607-10599606 Eucalyptus grandis
Eucgr.F00738 10.0kb downstream 10.0kb downstream 13361 true Chr06: 10599607-10612967 Eucalyptus grandis
Eucgr.F00738 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10602968-10612967 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061656 5270 Rosid View MSA
123739553 5271 Pentapetalae View MSA
122786719 5272 Eudicot View MSA
122047269 5273 Angiosperm View MSA
121346559 5274 Embryophyte View MSA
123424366 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8126 0.0 34.9715    
cufflinks 19.3392 0.0 42.8024    
cufflinks 18.2817 0.0 40.447    
cufflinks 19.0723 0.0 42.2208    
cufflinks 12.3384 0.0 27.3476   Low
cufflinks 17.8933 0.0 39.5709    

0 Strain