Gene : Eucgr.F00658 E. grandis v2.0
Defline:  (1 of 1) PTHR31963:SF4 - F11F12.5 PROTEIN Genomic Order:  641
Name:  ? Eucgr.F00658 Secondary Identifier:  ? PAC:32055887
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00658 0.5kb upstream 0.5kb upstream 4397 true Chr06: 9586263-9590659 Eucalyptus grandis
Eucgr.F00658 0.5kb upstream 0.5kb upstream 500 false Chr06: 9590160-9590659 Eucalyptus grandis
Eucgr.F00658 0.5kb downstream 0.5kb downstream 4397 true Chr06: 9585763-9590159 Eucalyptus grandis
Eucgr.F00658 0.5kb downstream 0.5kb downstream 500 false Chr06: 9585763-9586262 Eucalyptus grandis
Eucgr.F00658 1.0kb upstream 1.0kb upstream 4897 true Chr06: 9586263-9591159 Eucalyptus grandis
Eucgr.F00658 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9590160-9591159 Eucalyptus grandis
Eucgr.F00658 1.0kb downstream 1.0kb downstream 4897 true Chr06: 9585263-9590159 Eucalyptus grandis
Eucgr.F00658 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9585263-9586262 Eucalyptus grandis
Eucgr.F00658 2.0kb upstream 2.0kb upstream 5897 true Chr06: 9586263-9592159 Eucalyptus grandis
Eucgr.F00658 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9590160-9592159 Eucalyptus grandis
Eucgr.F00658 2.0kb downstream 2.0kb downstream 5897 true Chr06: 9584263-9590159 Eucalyptus grandis
Eucgr.F00658 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9584263-9586262 Eucalyptus grandis
Eucgr.F00658 5.0kb upstream 5.0kb upstream 8897 true Chr06: 9586263-9595159 Eucalyptus grandis
Eucgr.F00658 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9590160-9595159 Eucalyptus grandis
Eucgr.F00658 5.0kb downstream 5.0kb downstream 8897 true Chr06: 9581263-9590159 Eucalyptus grandis
Eucgr.F00658 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9581263-9586262 Eucalyptus grandis
Eucgr.F00658 10.0kb upstream 10.0kb upstream 13897 true Chr06: 9586263-9600159 Eucalyptus grandis
Eucgr.F00658 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9590160-9600159 Eucalyptus grandis
Eucgr.F00658 10.0kb downstream 10.0kb downstream 13897 true Chr06: 9576263-9590159 Eucalyptus grandis
Eucgr.F00658 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9576263-9586262 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041284 5273 Angiosperm View MSA
124067950 5270 Rosid View MSA
123751091 5271 Pentapetalae View MSA
122792359 5272 Eudicot View MSA
121349766 5274 Embryophyte View MSA
123381435 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.04879 0.0 8.0291    
cufflinks 22.7424 0.0 50.6477    
cufflinks 4.00174 0.0 10.2793    
cufflinks 29.7792 0.0 65.9725   High
cufflinks 20.9119 0.0 46.761    
cufflinks 2.46402 0.0 6.62223   Low

0 Strain