Gene : Eucgr.F00633 E. grandis v2.0
Defline:  (1 of 64) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  617
Name:  ? Eucgr.F00633 Secondary Identifier:  ? PAC:32054709
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1081 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00633 0.5kb upstream 0.5kb upstream 2241 true Chr06: 9253656-9255896 Eucalyptus grandis
Eucgr.F00633 0.5kb upstream 0.5kb upstream 500 false Chr06: 9255397-9255896 Eucalyptus grandis
Eucgr.F00633 0.5kb downstream 0.5kb downstream 2241 true Chr06: 9253156-9255396 Eucalyptus grandis
Eucgr.F00633 0.5kb downstream 0.5kb downstream 500 false Chr06: 9253156-9253655 Eucalyptus grandis
Eucgr.F00633 1.0kb upstream 1.0kb upstream 2741 true Chr06: 9253656-9256396 Eucalyptus grandis
Eucgr.F00633 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9255397-9256396 Eucalyptus grandis
Eucgr.F00633 1.0kb downstream 1.0kb downstream 2741 true Chr06: 9252656-9255396 Eucalyptus grandis
Eucgr.F00633 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9252656-9253655 Eucalyptus grandis
Eucgr.F00633 2.0kb upstream 2.0kb upstream 3741 true Chr06: 9253656-9257396 Eucalyptus grandis
Eucgr.F00633 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9255397-9257396 Eucalyptus grandis
Eucgr.F00633 2.0kb downstream 2.0kb downstream 3741 true Chr06: 9251656-9255396 Eucalyptus grandis
Eucgr.F00633 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9251656-9253655 Eucalyptus grandis
Eucgr.F00633 5.0kb upstream 5.0kb upstream 6741 true Chr06: 9253656-9260396 Eucalyptus grandis
Eucgr.F00633 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9255397-9260396 Eucalyptus grandis
Eucgr.F00633 5.0kb downstream 5.0kb downstream 6741 true Chr06: 9248656-9255396 Eucalyptus grandis
Eucgr.F00633 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9248656-9253655 Eucalyptus grandis
Eucgr.F00633 10.0kb upstream 10.0kb upstream 11741 true Chr06: 9253656-9265396 Eucalyptus grandis
Eucgr.F00633 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9255397-9265396 Eucalyptus grandis
Eucgr.F00633 10.0kb downstream 10.0kb downstream 11741 true Chr06: 9243656-9255396 Eucalyptus grandis
Eucgr.F00633 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9243656-9253655 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074410 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain