Gene : Eucgr.F00600 E. grandis v2.0
Defline:  (1 of 1) PTHR12300:SF26 - HVA22-LIKE PROTEIN G-RELATED Genomic Order:  589
Name:  ? Eucgr.F00600 Secondary Identifier:  ? PAC:32053370
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00600 0.5kb upstream 0.5kb upstream 3650 true Chr06: 8732585-8736234 Eucalyptus grandis
Eucgr.F00600 0.5kb upstream 0.5kb upstream 500 false Chr06: 8735735-8736234 Eucalyptus grandis
Eucgr.F00600 0.5kb downstream 0.5kb downstream 3650 true Chr06: 8732085-8735734 Eucalyptus grandis
Eucgr.F00600 0.5kb downstream 0.5kb downstream 500 false Chr06: 8732085-8732584 Eucalyptus grandis
Eucgr.F00600 1.0kb upstream 1.0kb upstream 4150 true Chr06: 8732585-8736734 Eucalyptus grandis
Eucgr.F00600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8735735-8736734 Eucalyptus grandis
Eucgr.F00600 1.0kb downstream 1.0kb downstream 4150 true Chr06: 8731585-8735734 Eucalyptus grandis
Eucgr.F00600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8731585-8732584 Eucalyptus grandis
Eucgr.F00600 2.0kb upstream 2.0kb upstream 5150 true Chr06: 8732585-8737734 Eucalyptus grandis
Eucgr.F00600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8735735-8737734 Eucalyptus grandis
Eucgr.F00600 2.0kb downstream 2.0kb downstream 5150 true Chr06: 8730585-8735734 Eucalyptus grandis
Eucgr.F00600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8730585-8732584 Eucalyptus grandis
Eucgr.F00600 5.0kb upstream 5.0kb upstream 8150 true Chr06: 8732585-8740734 Eucalyptus grandis
Eucgr.F00600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8735735-8740734 Eucalyptus grandis
Eucgr.F00600 5.0kb downstream 5.0kb downstream 8150 true Chr06: 8727585-8735734 Eucalyptus grandis
Eucgr.F00600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8727585-8732584 Eucalyptus grandis
Eucgr.F00600 10.0kb upstream 10.0kb upstream 13150 true Chr06: 8732585-8745734 Eucalyptus grandis
Eucgr.F00600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8735735-8745734 Eucalyptus grandis
Eucgr.F00600 10.0kb downstream 10.0kb downstream 13150 true Chr06: 8722585-8735734 Eucalyptus grandis
Eucgr.F00600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8722585-8732584 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068207 5270 Rosid View MSA
123753523 5271 Pentapetalae View MSA
122794920 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.9895 0.0 74.7796    
cufflinks 101.065 0.0 287.338 High High
cufflinks 18.9503 0.0 52.8514   Low
cufflinks 88.493 0.0 233.662 High High
cufflinks 54.4803 0.0 133.813 High  
cufflinks 21.6644 0.0 55.975    

0 Strain