Gene : Eucgr.F00487 E. grandis v2.0
Defline:  (1 of 4) PTHR10551//PTHR10551:SF12 - FASCIN Genomic Order:  456
Name:  ? Eucgr.F00487 Secondary Identifier:  ? PAC:32053524
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F00487 0.5kb upstream 0.5kb upstream 5516 true Chr06: 6834476-6839991 Eucalyptus grandis
Eucgr.F00487 0.5kb upstream 0.5kb upstream 500 false Chr06: 6834476-6834975 Eucalyptus grandis
Eucgr.F00487 0.5kb downstream 0.5kb downstream 5516 true Chr06: 6834976-6840491 Eucalyptus grandis
Eucgr.F00487 0.5kb downstream 0.5kb downstream 500 false Chr06: 6839992-6840491 Eucalyptus grandis
Eucgr.F00487 1.0kb upstream 1.0kb upstream 6016 true Chr06: 6833976-6839991 Eucalyptus grandis
Eucgr.F00487 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6833976-6834975 Eucalyptus grandis
Eucgr.F00487 1.0kb downstream 1.0kb downstream 6016 true Chr06: 6834976-6840991 Eucalyptus grandis
Eucgr.F00487 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6839992-6840991 Eucalyptus grandis
Eucgr.F00487 2.0kb upstream 2.0kb upstream 7016 true Chr06: 6832976-6839991 Eucalyptus grandis
Eucgr.F00487 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6832976-6834975 Eucalyptus grandis
Eucgr.F00487 2.0kb downstream 2.0kb downstream 7016 true Chr06: 6834976-6841991 Eucalyptus grandis
Eucgr.F00487 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6839992-6841991 Eucalyptus grandis
Eucgr.F00487 5.0kb upstream 5.0kb upstream 10016 true Chr06: 6829976-6839991 Eucalyptus grandis
Eucgr.F00487 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6829976-6834975 Eucalyptus grandis
Eucgr.F00487 5.0kb downstream 5.0kb downstream 10016 true Chr06: 6834976-6844991 Eucalyptus grandis
Eucgr.F00487 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6839992-6844991 Eucalyptus grandis
Eucgr.F00487 10.0kb upstream 10.0kb upstream 15016 true Chr06: 6824976-6839991 Eucalyptus grandis
Eucgr.F00487 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6824976-6834975 Eucalyptus grandis
Eucgr.F00487 10.0kb downstream 10.0kb downstream 15016 true Chr06: 6834976-6849991 Eucalyptus grandis
Eucgr.F00487 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6839992-6849991 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070135 5270 Rosid View MSA
123746465 5271 Pentapetalae View MSA
122796777 5272 Eudicot View MSA
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0129793 0.0 0.118179 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0944099 0.0 0.379318 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain