Gene : Eucgr.F01461 E. grandis v2.0
Defline:  (1 of 1) PTHR12581 - HIV-1 REV BINDING PROTEIN 2, 3 Genomic Order:  1243
Name:  ? Eucgr.F01461 Secondary Identifier:  ? PAC:32056307
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01461 0.5kb upstream 0.5kb upstream 6099 true Chr06: 19737339-19743437 Eucalyptus grandis
Eucgr.F01461 0.5kb upstream 0.5kb upstream 500 false Chr06: 19737339-19737838 Eucalyptus grandis
Eucgr.F01461 0.5kb downstream 0.5kb downstream 6099 true Chr06: 19737839-19743937 Eucalyptus grandis
Eucgr.F01461 0.5kb downstream 0.5kb downstream 500 false Chr06: 19743438-19743937 Eucalyptus grandis
Eucgr.F01461 1.0kb upstream 1.0kb upstream 6599 true Chr06: 19736839-19743437 Eucalyptus grandis
Eucgr.F01461 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19736839-19737838 Eucalyptus grandis
Eucgr.F01461 1.0kb downstream 1.0kb downstream 6599 true Chr06: 19737839-19744437 Eucalyptus grandis
Eucgr.F01461 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19743438-19744437 Eucalyptus grandis
Eucgr.F01461 2.0kb upstream 2.0kb upstream 7599 true Chr06: 19735839-19743437 Eucalyptus grandis
Eucgr.F01461 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19735839-19737838 Eucalyptus grandis
Eucgr.F01461 2.0kb downstream 2.0kb downstream 7599 true Chr06: 19737839-19745437 Eucalyptus grandis
Eucgr.F01461 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19743438-19745437 Eucalyptus grandis
Eucgr.F01461 5.0kb upstream 5.0kb upstream 10599 true Chr06: 19732839-19743437 Eucalyptus grandis
Eucgr.F01461 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19732839-19737838 Eucalyptus grandis
Eucgr.F01461 5.0kb downstream 5.0kb downstream 10599 true Chr06: 19737839-19748437 Eucalyptus grandis
Eucgr.F01461 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19743438-19748437 Eucalyptus grandis
Eucgr.F01461 10.0kb upstream 10.0kb upstream 15599 true Chr06: 19727839-19743437 Eucalyptus grandis
Eucgr.F01461 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19727839-19737838 Eucalyptus grandis
Eucgr.F01461 10.0kb downstream 10.0kb downstream 15599 true Chr06: 19737839-19753437 Eucalyptus grandis
Eucgr.F01461 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19743438-19753437 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064553 5270 Rosid View MSA
123738984 5271 Pentapetalae View MSA
122790120 5272 Eudicot View MSA
122041852 5273 Angiosperm View MSA
121344485 5274 Embryophyte View MSA
123424552 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.4575 0.0 51.8059    
cufflinks 21.5598 0.0 49.6502    
cufflinks 24.4889 0.0 55.6993    
cufflinks 18.1176 0.0 41.2667   Low
cufflinks 26.8775 0.0 63.0856   High
cufflinks 20.6827 0.0 47.3795    

0 Strain