Gene : Eucgr.F01450 E. grandis v2.0
Defline:  (1 of 1) PTHR12496 - CGI-41 METHYLTRANSFERASE Genomic Order:  1233
Name:  ? Eucgr.F01450 Secondary Identifier:  ? PAC:32052835
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01450 0.5kb upstream 0.5kb upstream 8724 true Chr06: 19648938-19657661 Eucalyptus grandis
Eucgr.F01450 0.5kb upstream 0.5kb upstream 500 false Chr06: 19657162-19657661 Eucalyptus grandis
Eucgr.F01450 0.5kb downstream 0.5kb downstream 8724 true Chr06: 19648438-19657161 Eucalyptus grandis
Eucgr.F01450 0.5kb downstream 0.5kb downstream 500 false Chr06: 19648438-19648937 Eucalyptus grandis
Eucgr.F01450 1.0kb upstream 1.0kb upstream 9224 true Chr06: 19648938-19658161 Eucalyptus grandis
Eucgr.F01450 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19657162-19658161 Eucalyptus grandis
Eucgr.F01450 1.0kb downstream 1.0kb downstream 9224 true Chr06: 19647938-19657161 Eucalyptus grandis
Eucgr.F01450 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19647938-19648937 Eucalyptus grandis
Eucgr.F01450 2.0kb upstream 2.0kb upstream 10224 true Chr06: 19648938-19659161 Eucalyptus grandis
Eucgr.F01450 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19657162-19659161 Eucalyptus grandis
Eucgr.F01450 2.0kb downstream 2.0kb downstream 10224 true Chr06: 19646938-19657161 Eucalyptus grandis
Eucgr.F01450 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19646938-19648937 Eucalyptus grandis
Eucgr.F01450 5.0kb upstream 5.0kb upstream 13224 true Chr06: 19648938-19662161 Eucalyptus grandis
Eucgr.F01450 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19657162-19662161 Eucalyptus grandis
Eucgr.F01450 5.0kb downstream 5.0kb downstream 13224 true Chr06: 19643938-19657161 Eucalyptus grandis
Eucgr.F01450 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19643938-19648937 Eucalyptus grandis
Eucgr.F01450 10.0kb upstream 10.0kb upstream 18224 true Chr06: 19648938-19667161 Eucalyptus grandis
Eucgr.F01450 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19657162-19667161 Eucalyptus grandis
Eucgr.F01450 10.0kb downstream 10.0kb downstream 18224 true Chr06: 19638938-19657161 Eucalyptus grandis
Eucgr.F01450 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19638938-19648937 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041435 5273 Angiosperm View MSA
124063111 5270 Rosid View MSA
123747553 5271 Pentapetalae View MSA
122789277 5272 Eudicot View MSA
121344340 5274 Embryophyte View MSA
123380024 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.01987 0.0 12.2416    
cufflinks 4.83966 0.0 11.852    
cufflinks 4.94554 0.0 12.2467    
cufflinks 4.91338 0.0 12.0584    
cufflinks 4.01187 0.0 10.1443    
cufflinks 10.0249 0.0 23.1019   High

0 Strain