Gene : Eucgr.F01379 E. grandis v2.0
Defline:  (1 of 1) KOG3276 - Uncharacterized conserved protein, contains YggU domain Genomic Order:  1174
Name:  ? Eucgr.F01379 Secondary Identifier:  ? PAC:32057216
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01379 0.5kb upstream 0.5kb upstream 3712 true Chr06: 18860189-18863900 Eucalyptus grandis
Eucgr.F01379 0.5kb upstream 0.5kb upstream 500 false Chr06: 18863401-18863900 Eucalyptus grandis
Eucgr.F01379 0.5kb downstream 0.5kb downstream 3712 true Chr06: 18859689-18863400 Eucalyptus grandis
Eucgr.F01379 0.5kb downstream 0.5kb downstream 500 false Chr06: 18859689-18860188 Eucalyptus grandis
Eucgr.F01379 1.0kb upstream 1.0kb upstream 4212 true Chr06: 18860189-18864400 Eucalyptus grandis
Eucgr.F01379 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18863401-18864400 Eucalyptus grandis
Eucgr.F01379 1.0kb downstream 1.0kb downstream 4212 true Chr06: 18859189-18863400 Eucalyptus grandis
Eucgr.F01379 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18859189-18860188 Eucalyptus grandis
Eucgr.F01379 2.0kb upstream 2.0kb upstream 5212 true Chr06: 18860189-18865400 Eucalyptus grandis
Eucgr.F01379 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18863401-18865400 Eucalyptus grandis
Eucgr.F01379 2.0kb downstream 2.0kb downstream 5212 true Chr06: 18858189-18863400 Eucalyptus grandis
Eucgr.F01379 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18858189-18860188 Eucalyptus grandis
Eucgr.F01379 5.0kb upstream 5.0kb upstream 8212 true Chr06: 18860189-18868400 Eucalyptus grandis
Eucgr.F01379 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18863401-18868400 Eucalyptus grandis
Eucgr.F01379 5.0kb downstream 5.0kb downstream 8212 true Chr06: 18855189-18863400 Eucalyptus grandis
Eucgr.F01379 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18855189-18860188 Eucalyptus grandis
Eucgr.F01379 10.0kb upstream 10.0kb upstream 13212 true Chr06: 18860189-18873400 Eucalyptus grandis
Eucgr.F01379 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18863401-18873400 Eucalyptus grandis
Eucgr.F01379 10.0kb downstream 10.0kb downstream 13212 true Chr06: 18850189-18863400 Eucalyptus grandis
Eucgr.F01379 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18850189-18860188 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066512 5270 Rosid View MSA
123740389 5271 Pentapetalae View MSA
122788461 5272 Eudicot View MSA
122045609 5273 Angiosperm View MSA
121344013 5274 Embryophyte View MSA
123423948 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.88012 0.0 12.4014    
cufflinks 2.52673 0.0 7.08263   Low
cufflinks 6.37863 0.0 15.4065    
cufflinks 5.50575 0.0 13.6155    
cufflinks 5.22585 0.0 13.1713    
cufflinks 4.98621 0.0 12.6826    

0 Strain