Gene : Eucgr.F01381 E. grandis v2.0
Defline:  (1 of 1) PTHR31044:SF19 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1176
Name:  ? Eucgr.F01381 Secondary Identifier:  ? PAC:32056558
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01381 0.5kb upstream 0.5kb upstream 2019 true Chr06: 18875768-18877786 Eucalyptus grandis
Eucgr.F01381 0.5kb upstream 0.5kb upstream 500 false Chr06: 18875768-18876267 Eucalyptus grandis
Eucgr.F01381 0.5kb downstream 0.5kb downstream 2019 true Chr06: 18876268-18878286 Eucalyptus grandis
Eucgr.F01381 0.5kb downstream 0.5kb downstream 500 false Chr06: 18877787-18878286 Eucalyptus grandis
Eucgr.F01381 1.0kb upstream 1.0kb upstream 2519 true Chr06: 18875268-18877786 Eucalyptus grandis
Eucgr.F01381 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18875268-18876267 Eucalyptus grandis
Eucgr.F01381 1.0kb downstream 1.0kb downstream 2519 true Chr06: 18876268-18878786 Eucalyptus grandis
Eucgr.F01381 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18877787-18878786 Eucalyptus grandis
Eucgr.F01381 2.0kb upstream 2.0kb upstream 3519 true Chr06: 18874268-18877786 Eucalyptus grandis
Eucgr.F01381 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18874268-18876267 Eucalyptus grandis
Eucgr.F01381 2.0kb downstream 2.0kb downstream 3519 true Chr06: 18876268-18879786 Eucalyptus grandis
Eucgr.F01381 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18877787-18879786 Eucalyptus grandis
Eucgr.F01381 5.0kb upstream 5.0kb upstream 6519 true Chr06: 18871268-18877786 Eucalyptus grandis
Eucgr.F01381 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18871268-18876267 Eucalyptus grandis
Eucgr.F01381 5.0kb downstream 5.0kb downstream 6519 true Chr06: 18876268-18882786 Eucalyptus grandis
Eucgr.F01381 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18877787-18882786 Eucalyptus grandis
Eucgr.F01381 10.0kb upstream 10.0kb upstream 11519 true Chr06: 18866268-18877786 Eucalyptus grandis
Eucgr.F01381 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18866268-18876267 Eucalyptus grandis
Eucgr.F01381 10.0kb downstream 10.0kb downstream 11519 true Chr06: 18876268-18887786 Eucalyptus grandis
Eucgr.F01381 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18877787-18887786 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067142 5270 Rosid View MSA
123750670 5271 Pentapetalae View MSA
122789328 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.99678 0.0 25.8442    
cufflinks 1.26825 0.0 4.08308   Low
cufflinks 6.23204 0.0 16.8817    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.26392 0.0 16.9163    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain