Gene : Eucgr.F01368 E. grandis v2.0
Defline:  (1 of 2) PTHR20275:SF2 - NADH KINASE Genomic Order:  1163
Name:  ? Eucgr.F01368 Secondary Identifier:  ? PAC:32057434
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5083 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01368 0.5kb upstream 0.5kb upstream 2725 true Chr06: 18814858-18817582 Eucalyptus grandis
Eucgr.F01368 0.5kb upstream 0.5kb upstream 500 false Chr06: 18817083-18817582 Eucalyptus grandis
Eucgr.F01368 0.5kb downstream 0.5kb downstream 2725 true Chr06: 18814358-18817082 Eucalyptus grandis
Eucgr.F01368 0.5kb downstream 0.5kb downstream 500 false Chr06: 18814358-18814857 Eucalyptus grandis
Eucgr.F01368 1.0kb upstream 1.0kb upstream 3225 true Chr06: 18814858-18818082 Eucalyptus grandis
Eucgr.F01368 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18817083-18818082 Eucalyptus grandis
Eucgr.F01368 1.0kb downstream 1.0kb downstream 3225 true Chr06: 18813858-18817082 Eucalyptus grandis
Eucgr.F01368 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18813858-18814857 Eucalyptus grandis
Eucgr.F01368 2.0kb upstream 2.0kb upstream 4225 true Chr06: 18814858-18819082 Eucalyptus grandis
Eucgr.F01368 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18817083-18819082 Eucalyptus grandis
Eucgr.F01368 2.0kb downstream 2.0kb downstream 4225 true Chr06: 18812858-18817082 Eucalyptus grandis
Eucgr.F01368 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18812858-18814857 Eucalyptus grandis
Eucgr.F01368 5.0kb upstream 5.0kb upstream 7225 true Chr06: 18814858-18822082 Eucalyptus grandis
Eucgr.F01368 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18817083-18822082 Eucalyptus grandis
Eucgr.F01368 5.0kb downstream 5.0kb downstream 7225 true Chr06: 18809858-18817082 Eucalyptus grandis
Eucgr.F01368 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18809858-18814857 Eucalyptus grandis
Eucgr.F01368 10.0kb upstream 10.0kb upstream 12225 true Chr06: 18814858-18827082 Eucalyptus grandis
Eucgr.F01368 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18817083-18827082 Eucalyptus grandis
Eucgr.F01368 10.0kb downstream 10.0kb downstream 12225 true Chr06: 18804858-18817082 Eucalyptus grandis
Eucgr.F01368 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18804858-18814857 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067358 5270 Rosid View MSA
123747292 5271 Pentapetalae View MSA
122792371 5272 Eudicot View MSA
122049268 5273 Angiosperm View MSA
121346179 5274 Embryophyte View MSA
123425212 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.68797 0.0 14.2212    
cufflinks 2.19268 0.0 6.02969   Low
cufflinks 6.79619 0.0 16.7517    
cufflinks 4.31678 0.0 11.1319    
cufflinks 6.33662 0.0 15.6696    
cufflinks 3.86019 0.0 10.0419    

0 Strain