Gene : Eucgr.F01299 E. grandis v2.0
Defline:  (1 of 1) KOG1559 - Gamma-glutamyl hydrolase Genomic Order:  1115
Name:  ? Eucgr.F01299 Secondary Identifier:  ? PAC:32052616
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-2161B Eucalyptus grandis pathologic  
Egrandis PWY-6842 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01299 0.5kb upstream 0.5kb upstream 5766 true Chr06: 17331160-17336925 Eucalyptus grandis
Eucgr.F01299 0.5kb upstream 0.5kb upstream 500 false Chr06: 17336426-17336925 Eucalyptus grandis
Eucgr.F01299 0.5kb downstream 0.5kb downstream 5766 true Chr06: 17330660-17336425 Eucalyptus grandis
Eucgr.F01299 0.5kb downstream 0.5kb downstream 500 false Chr06: 17330660-17331159 Eucalyptus grandis
Eucgr.F01299 1.0kb upstream 1.0kb upstream 6266 true Chr06: 17331160-17337425 Eucalyptus grandis
Eucgr.F01299 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17336426-17337425 Eucalyptus grandis
Eucgr.F01299 1.0kb downstream 1.0kb downstream 6266 true Chr06: 17330160-17336425 Eucalyptus grandis
Eucgr.F01299 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17330160-17331159 Eucalyptus grandis
Eucgr.F01299 2.0kb upstream 2.0kb upstream 7266 true Chr06: 17331160-17338425 Eucalyptus grandis
Eucgr.F01299 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17336426-17338425 Eucalyptus grandis
Eucgr.F01299 2.0kb downstream 2.0kb downstream 7266 true Chr06: 17329160-17336425 Eucalyptus grandis
Eucgr.F01299 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17329160-17331159 Eucalyptus grandis
Eucgr.F01299 5.0kb upstream 5.0kb upstream 10266 true Chr06: 17331160-17341425 Eucalyptus grandis
Eucgr.F01299 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17336426-17341425 Eucalyptus grandis
Eucgr.F01299 5.0kb downstream 5.0kb downstream 10266 true Chr06: 17326160-17336425 Eucalyptus grandis
Eucgr.F01299 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17326160-17331159 Eucalyptus grandis
Eucgr.F01299 10.0kb upstream 10.0kb upstream 15266 true Chr06: 17331160-17346425 Eucalyptus grandis
Eucgr.F01299 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17336426-17346425 Eucalyptus grandis
Eucgr.F01299 10.0kb downstream 10.0kb downstream 15266 true Chr06: 17321160-17336425 Eucalyptus grandis
Eucgr.F01299 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17321160-17331159 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064473 5270 Rosid View MSA
123739690 5271 Pentapetalae View MSA
122790528 5272 Eudicot View MSA
122043288 5273 Angiosperm View MSA
121347510 5274 Embryophyte View MSA
123426892 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.517 0.0 116.506 High  
cufflinks 41.2708 0.0 91.2988    
cufflinks 43.4525 0.0 96.1443 High  
cufflinks 34.3724 0.0 76.0287   Low
cufflinks 57.3675 0.0 127.53 High High
cufflinks 34.3068 0.0 75.8891 High Low

0 Strain