Gene : Eucgr.F01244 E. grandis v2.0
Defline:  (1 of 1) PTHR16517//PTHR16517:SF35 - TUBBY-RELATED Genomic Order:  1091
Name:  ? Eucgr.F01244 Secondary Identifier:  ? PAC:32053550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01244 0.5kb upstream 0.5kb upstream 5160 true Chr06: 16556710-16561869 Eucalyptus grandis
Eucgr.F01244 0.5kb upstream 0.5kb upstream 500 false Chr06: 16561370-16561869 Eucalyptus grandis
Eucgr.F01244 0.5kb downstream 0.5kb downstream 5160 true Chr06: 16556210-16561369 Eucalyptus grandis
Eucgr.F01244 0.5kb downstream 0.5kb downstream 500 false Chr06: 16556210-16556709 Eucalyptus grandis
Eucgr.F01244 1.0kb upstream 1.0kb upstream 5660 true Chr06: 16556710-16562369 Eucalyptus grandis
Eucgr.F01244 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16561370-16562369 Eucalyptus grandis
Eucgr.F01244 1.0kb downstream 1.0kb downstream 5660 true Chr06: 16555710-16561369 Eucalyptus grandis
Eucgr.F01244 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16555710-16556709 Eucalyptus grandis
Eucgr.F01244 2.0kb upstream 2.0kb upstream 6660 true Chr06: 16556710-16563369 Eucalyptus grandis
Eucgr.F01244 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16561370-16563369 Eucalyptus grandis
Eucgr.F01244 2.0kb downstream 2.0kb downstream 6660 true Chr06: 16554710-16561369 Eucalyptus grandis
Eucgr.F01244 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16554710-16556709 Eucalyptus grandis
Eucgr.F01244 5.0kb upstream 5.0kb upstream 9660 true Chr06: 16556710-16566369 Eucalyptus grandis
Eucgr.F01244 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16561370-16566369 Eucalyptus grandis
Eucgr.F01244 5.0kb downstream 5.0kb downstream 9660 true Chr06: 16551710-16561369 Eucalyptus grandis
Eucgr.F01244 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16551710-16556709 Eucalyptus grandis
Eucgr.F01244 10.0kb upstream 10.0kb upstream 14660 true Chr06: 16556710-16571369 Eucalyptus grandis
Eucgr.F01244 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16561370-16571369 Eucalyptus grandis
Eucgr.F01244 10.0kb downstream 10.0kb downstream 14660 true Chr06: 16546710-16561369 Eucalyptus grandis
Eucgr.F01244 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16546710-16556709 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061146 5270 Rosid View MSA
123740168 5271 Pentapetalae View MSA
122785762 5272 Eudicot View MSA
122045291 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121310429 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.9816 0.0 115.376 High  
cufflinks 54.6248 0.0 148.155 High  
cufflinks 36.0991 0.0 94.9279 High  
cufflinks 75.4995 0.0 214.015 High High
cufflinks 59.0362 0.0 140.964 High  
cufflinks 24.9967 0.0 56.2662   Low

0 Strain