Gene : Eucgr.F01206 E. grandis v2.0
Defline:  (1 of 1) PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Genomic Order:  1056
Name:  ? Eucgr.F01206 Secondary Identifier:  ? PAC:32057112
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01206 0.5kb upstream 0.5kb upstream 3786 true Chr06: 16241171-16244956 Eucalyptus grandis
Eucgr.F01206 0.5kb upstream 0.5kb upstream 500 false Chr06: 16241171-16241670 Eucalyptus grandis
Eucgr.F01206 0.5kb downstream 0.5kb downstream 3786 true Chr06: 16241671-16245456 Eucalyptus grandis
Eucgr.F01206 0.5kb downstream 0.5kb downstream 500 false Chr06: 16244957-16245456 Eucalyptus grandis
Eucgr.F01206 1.0kb upstream 1.0kb upstream 4286 true Chr06: 16240671-16244956 Eucalyptus grandis
Eucgr.F01206 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16240671-16241670 Eucalyptus grandis
Eucgr.F01206 1.0kb downstream 1.0kb downstream 4286 true Chr06: 16241671-16245956 Eucalyptus grandis
Eucgr.F01206 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16244957-16245956 Eucalyptus grandis
Eucgr.F01206 2.0kb upstream 2.0kb upstream 5286 true Chr06: 16239671-16244956 Eucalyptus grandis
Eucgr.F01206 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16239671-16241670 Eucalyptus grandis
Eucgr.F01206 2.0kb downstream 2.0kb downstream 5286 true Chr06: 16241671-16246956 Eucalyptus grandis
Eucgr.F01206 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16244957-16246956 Eucalyptus grandis
Eucgr.F01206 5.0kb upstream 5.0kb upstream 8286 true Chr06: 16236671-16244956 Eucalyptus grandis
Eucgr.F01206 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16236671-16241670 Eucalyptus grandis
Eucgr.F01206 5.0kb downstream 5.0kb downstream 8286 true Chr06: 16241671-16249956 Eucalyptus grandis
Eucgr.F01206 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16244957-16249956 Eucalyptus grandis
Eucgr.F01206 10.0kb upstream 10.0kb upstream 13286 true Chr06: 16231671-16244956 Eucalyptus grandis
Eucgr.F01206 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16231671-16241670 Eucalyptus grandis
Eucgr.F01206 10.0kb downstream 10.0kb downstream 13286 true Chr06: 16241671-16254956 Eucalyptus grandis
Eucgr.F01206 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16244957-16254956 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060614 5270 Rosid View MSA
123737451 5271 Pentapetalae View MSA
122792150 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.2645 0.0 85.7596 High  
cufflinks 4.57695 0.0 10.8483    
cufflinks 24.3778 0.0 53.9767    
cufflinks 3.71676 0.0 8.97357    
cufflinks 4.43232 0.0 10.5532    
cufflinks 140.108 0.0 348.215 High High

0 Strain