Gene : Eucgr.F01171 E. grandis v2.0
Defline:  (1 of 1) PTHR11751:SF387 - AMINOTRANSFERASE TAT2-RELATED Genomic Order:  1025
Name:  ? Eucgr.F01171 Secondary Identifier:  ? PAC:32053723
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01171 0.5kb upstream 0.5kb upstream 4020 true Chr06: 15920487-15924506 Eucalyptus grandis
Eucgr.F01171 0.5kb upstream 0.5kb upstream 500 false Chr06: 15920487-15920986 Eucalyptus grandis
Eucgr.F01171 0.5kb downstream 0.5kb downstream 4020 true Chr06: 15920987-15925006 Eucalyptus grandis
Eucgr.F01171 0.5kb downstream 0.5kb downstream 500 false Chr06: 15924507-15925006 Eucalyptus grandis
Eucgr.F01171 1.0kb upstream 1.0kb upstream 4520 true Chr06: 15919987-15924506 Eucalyptus grandis
Eucgr.F01171 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15919987-15920986 Eucalyptus grandis
Eucgr.F01171 1.0kb downstream 1.0kb downstream 4520 true Chr06: 15920987-15925506 Eucalyptus grandis
Eucgr.F01171 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15924507-15925506 Eucalyptus grandis
Eucgr.F01171 2.0kb upstream 2.0kb upstream 5520 true Chr06: 15918987-15924506 Eucalyptus grandis
Eucgr.F01171 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15918987-15920986 Eucalyptus grandis
Eucgr.F01171 2.0kb downstream 2.0kb downstream 5520 true Chr06: 15920987-15926506 Eucalyptus grandis
Eucgr.F01171 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15924507-15926506 Eucalyptus grandis
Eucgr.F01171 5.0kb upstream 5.0kb upstream 8520 true Chr06: 15915987-15924506 Eucalyptus grandis
Eucgr.F01171 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15915987-15920986 Eucalyptus grandis
Eucgr.F01171 5.0kb downstream 5.0kb downstream 8520 true Chr06: 15920987-15929506 Eucalyptus grandis
Eucgr.F01171 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15924507-15929506 Eucalyptus grandis
Eucgr.F01171 10.0kb upstream 10.0kb upstream 13520 true Chr06: 15910987-15924506 Eucalyptus grandis
Eucgr.F01171 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15910987-15920986 Eucalyptus grandis
Eucgr.F01171 10.0kb downstream 10.0kb downstream 13520 true Chr06: 15920987-15934506 Eucalyptus grandis
Eucgr.F01171 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15924507-15934506 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063132 5270 Rosid View MSA
123742596 5271 Pentapetalae View MSA
122795476 5272 Eudicot View MSA
122051547 5273 Angiosperm View MSA
121351636 5274 Embryophyte View MSA
123426927 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.175 0.0 35.1436    
cufflinks 0.39442 0.0 1.52846 Low Low
cufflinks 15.1925 0.0 35.356    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 12.0945 0.0 28.783    

0 Strain