Gene : Eucgr.F01178 E. grandis v2.0
Defline:  (1 of 1) PF11282 - Protein of unknown function (DUF3082) (DUF3082) Genomic Order:  1031
Name:  ? Eucgr.F01178 Secondary Identifier:  ? PAC:32056612
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01178 0.5kb upstream 0.5kb upstream 2570 true Chr06: 15958352-15960921 Eucalyptus grandis
Eucgr.F01178 0.5kb upstream 0.5kb upstream 500 false Chr06: 15958352-15958851 Eucalyptus grandis
Eucgr.F01178 0.5kb downstream 0.5kb downstream 2570 true Chr06: 15958852-15961421 Eucalyptus grandis
Eucgr.F01178 0.5kb downstream 0.5kb downstream 500 false Chr06: 15960922-15961421 Eucalyptus grandis
Eucgr.F01178 1.0kb upstream 1.0kb upstream 3070 true Chr06: 15957852-15960921 Eucalyptus grandis
Eucgr.F01178 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15957852-15958851 Eucalyptus grandis
Eucgr.F01178 1.0kb downstream 1.0kb downstream 3070 true Chr06: 15958852-15961921 Eucalyptus grandis
Eucgr.F01178 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15960922-15961921 Eucalyptus grandis
Eucgr.F01178 2.0kb upstream 2.0kb upstream 4070 true Chr06: 15956852-15960921 Eucalyptus grandis
Eucgr.F01178 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15956852-15958851 Eucalyptus grandis
Eucgr.F01178 2.0kb downstream 2.0kb downstream 4070 true Chr06: 15958852-15962921 Eucalyptus grandis
Eucgr.F01178 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15960922-15962921 Eucalyptus grandis
Eucgr.F01178 5.0kb upstream 5.0kb upstream 7070 true Chr06: 15953852-15960921 Eucalyptus grandis
Eucgr.F01178 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15953852-15958851 Eucalyptus grandis
Eucgr.F01178 5.0kb downstream 5.0kb downstream 7070 true Chr06: 15958852-15965921 Eucalyptus grandis
Eucgr.F01178 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15960922-15965921 Eucalyptus grandis
Eucgr.F01178 10.0kb upstream 10.0kb upstream 12070 true Chr06: 15948852-15960921 Eucalyptus grandis
Eucgr.F01178 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15948852-15958851 Eucalyptus grandis
Eucgr.F01178 10.0kb downstream 10.0kb downstream 12070 true Chr06: 15958852-15970921 Eucalyptus grandis
Eucgr.F01178 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15960922-15970921 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063883 5270 Rosid View MSA
123739511 5271 Pentapetalae View MSA
122786347 5272 Eudicot View MSA
122042637 5273 Angiosperm View MSA
121346194 5274 Embryophyte View MSA
123428138 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.14053 0.0 13.1275    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.63353 0.0 4.70345    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.807433 0.0 2.49744    
cufflinks 26.8613 0.0 60.0208   High

0 Strain