Gene : Eucgr.F01184 E. grandis v2.0
Defline:  (1 of 2) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase Genomic Order:  1037
Name:  ? Eucgr.F01184 Secondary Identifier:  ? PAC:32055913
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01184 0.5kb upstream 0.5kb upstream 4478 true Chr06: 16000085-16004562 Eucalyptus grandis
Eucgr.F01184 0.5kb upstream 0.5kb upstream 500 false Chr06: 16000085-16000584 Eucalyptus grandis
Eucgr.F01184 0.5kb downstream 0.5kb downstream 4478 true Chr06: 16000585-16005062 Eucalyptus grandis
Eucgr.F01184 0.5kb downstream 0.5kb downstream 500 false Chr06: 16004563-16005062 Eucalyptus grandis
Eucgr.F01184 1.0kb upstream 1.0kb upstream 4978 true Chr06: 15999585-16004562 Eucalyptus grandis
Eucgr.F01184 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15999585-16000584 Eucalyptus grandis
Eucgr.F01184 1.0kb downstream 1.0kb downstream 4978 true Chr06: 16000585-16005562 Eucalyptus grandis
Eucgr.F01184 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16004563-16005562 Eucalyptus grandis
Eucgr.F01184 2.0kb upstream 2.0kb upstream 5978 true Chr06: 15998585-16004562 Eucalyptus grandis
Eucgr.F01184 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15998585-16000584 Eucalyptus grandis
Eucgr.F01184 2.0kb downstream 2.0kb downstream 5978 true Chr06: 16000585-16006562 Eucalyptus grandis
Eucgr.F01184 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16004563-16006562 Eucalyptus grandis
Eucgr.F01184 5.0kb upstream 5.0kb upstream 8978 true Chr06: 15995585-16004562 Eucalyptus grandis
Eucgr.F01184 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15995585-16000584 Eucalyptus grandis
Eucgr.F01184 5.0kb downstream 5.0kb downstream 8978 true Chr06: 16000585-16009562 Eucalyptus grandis
Eucgr.F01184 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16004563-16009562 Eucalyptus grandis
Eucgr.F01184 10.0kb upstream 10.0kb upstream 13978 true Chr06: 15990585-16004562 Eucalyptus grandis
Eucgr.F01184 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15990585-16000584 Eucalyptus grandis
Eucgr.F01184 10.0kb downstream 10.0kb downstream 13978 true Chr06: 16000585-16014562 Eucalyptus grandis
Eucgr.F01184 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16004563-16014562 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064618 5270 Rosid View MSA
123740810 5271 Pentapetalae View MSA
122786399 5272 Eudicot View MSA
122042428 5273 Angiosperm View MSA
121346859 5274 Embryophyte View MSA
123424235 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.7863 0.0 61.5537    
cufflinks 11.1064 0.0 25.5746   Low
cufflinks 18.5574 0.0 41.5715    
cufflinks 11.0913 0.0 25.5763   Low
cufflinks 35.2416 0.0 77.9351    
cufflinks 47.1448 0.0 104.506 High High

0 Strain