Gene : Eucgr.F01089 E. grandis v2.0
Defline:  (1 of 1) PTHR11071:SF174 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC Genomic Order:  952
Name:  ? Eucgr.F01089 Secondary Identifier:  ? PAC:32057840
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01089 0.5kb upstream 0.5kb upstream 6061 true Chr06: 14966689-14972749 Eucalyptus grandis
Eucgr.F01089 0.5kb upstream 0.5kb upstream 500 false Chr06: 14966689-14967188 Eucalyptus grandis
Eucgr.F01089 0.5kb downstream 0.5kb downstream 6061 true Chr06: 14967189-14973249 Eucalyptus grandis
Eucgr.F01089 0.5kb downstream 0.5kb downstream 500 false Chr06: 14972750-14973249 Eucalyptus grandis
Eucgr.F01089 1.0kb upstream 1.0kb upstream 6561 true Chr06: 14966189-14972749 Eucalyptus grandis
Eucgr.F01089 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14966189-14967188 Eucalyptus grandis
Eucgr.F01089 1.0kb downstream 1.0kb downstream 6561 true Chr06: 14967189-14973749 Eucalyptus grandis
Eucgr.F01089 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14972750-14973749 Eucalyptus grandis
Eucgr.F01089 2.0kb upstream 2.0kb upstream 7561 true Chr06: 14965189-14972749 Eucalyptus grandis
Eucgr.F01089 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14965189-14967188 Eucalyptus grandis
Eucgr.F01089 2.0kb downstream 2.0kb downstream 7561 true Chr06: 14967189-14974749 Eucalyptus grandis
Eucgr.F01089 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14972750-14974749 Eucalyptus grandis
Eucgr.F01089 5.0kb upstream 5.0kb upstream 10561 true Chr06: 14962189-14972749 Eucalyptus grandis
Eucgr.F01089 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14962189-14967188 Eucalyptus grandis
Eucgr.F01089 5.0kb downstream 5.0kb downstream 10561 true Chr06: 14967189-14977749 Eucalyptus grandis
Eucgr.F01089 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14972750-14977749 Eucalyptus grandis
Eucgr.F01089 10.0kb upstream 10.0kb upstream 15561 true Chr06: 14957189-14972749 Eucalyptus grandis
Eucgr.F01089 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14957189-14967188 Eucalyptus grandis
Eucgr.F01089 10.0kb downstream 10.0kb downstream 15561 true Chr06: 14967189-14982749 Eucalyptus grandis
Eucgr.F01089 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14972750-14982749 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050364 5270 Rosid View MSA
123743809 5271 Pentapetalae View MSA
122791846 5272 Eudicot View MSA
122046545 5273 Angiosperm View MSA
121347245 5274 Embryophyte View MSA
123428005 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.54507 0.0 11.2602    
cufflinks 4.11083 0.0 10.2255    
cufflinks 3.82349 0.0 9.60926    
cufflinks 1.25317 0.0 3.5041    
cufflinks 0.780331 0.0 2.30201   Low
cufflinks 10.0978 0.0 23.3412   High

0 Strain