Gene : Eucgr.F01090 E. grandis v2.0
Defline:  (1 of 2) PTHR11266:SF16 - PEROXISOMAL MEMBRANE (MPV17/PMP22) FAMILY PROTEIN Genomic Order:  953
Name:  ? Eucgr.F01090 Secondary Identifier:  ? PAC:32054933
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01090 0.5kb upstream 0.5kb upstream 4471 true Chr06: 14973102-14977572 Eucalyptus grandis
Eucgr.F01090 0.5kb upstream 0.5kb upstream 500 false Chr06: 14973102-14973601 Eucalyptus grandis
Eucgr.F01090 0.5kb downstream 0.5kb downstream 4471 true Chr06: 14973602-14978072 Eucalyptus grandis
Eucgr.F01090 0.5kb downstream 0.5kb downstream 500 false Chr06: 14977573-14978072 Eucalyptus grandis
Eucgr.F01090 1.0kb upstream 1.0kb upstream 4971 true Chr06: 14972602-14977572 Eucalyptus grandis
Eucgr.F01090 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14972602-14973601 Eucalyptus grandis
Eucgr.F01090 1.0kb downstream 1.0kb downstream 4971 true Chr06: 14973602-14978572 Eucalyptus grandis
Eucgr.F01090 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14977573-14978572 Eucalyptus grandis
Eucgr.F01090 2.0kb upstream 2.0kb upstream 5971 true Chr06: 14971602-14977572 Eucalyptus grandis
Eucgr.F01090 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14971602-14973601 Eucalyptus grandis
Eucgr.F01090 2.0kb downstream 2.0kb downstream 5971 true Chr06: 14973602-14979572 Eucalyptus grandis
Eucgr.F01090 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14977573-14979572 Eucalyptus grandis
Eucgr.F01090 5.0kb upstream 5.0kb upstream 8971 true Chr06: 14968602-14977572 Eucalyptus grandis
Eucgr.F01090 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14968602-14973601 Eucalyptus grandis
Eucgr.F01090 5.0kb downstream 5.0kb downstream 8971 true Chr06: 14973602-14982572 Eucalyptus grandis
Eucgr.F01090 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14977573-14982572 Eucalyptus grandis
Eucgr.F01090 10.0kb upstream 10.0kb upstream 13971 true Chr06: 14963602-14977572 Eucalyptus grandis
Eucgr.F01090 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14963602-14973601 Eucalyptus grandis
Eucgr.F01090 10.0kb downstream 10.0kb downstream 13971 true Chr06: 14973602-14987572 Eucalyptus grandis
Eucgr.F01090 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14977573-14987572 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069878 5270 Rosid View MSA
123741697 5271 Pentapetalae View MSA
122796269 5272 Eudicot View MSA
122044681 5273 Angiosperm View MSA
121345710 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8193 0.0 31.876    
cufflinks 0.401946 0.0 1.49177 Low Low
cufflinks 13.2172 0.0 31.1894    
cufflinks 0.867944 0.0 2.85604    
cufflinks 3.6429 0.0 9.5744    
cufflinks 99.2134 0.0 228.698 High High

0 Strain