Gene : Eucgr.F01102 E. grandis v2.0
Defline:  (1 of 1) PTHR22870:SF209 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 Genomic Order:  965
Name:  ? Eucgr.F01102 Secondary Identifier:  ? PAC:32053217
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01102 0.5kb upstream 0.5kb upstream 5227 true Chr06: 15074297-15079523 Eucalyptus grandis
Eucgr.F01102 0.5kb upstream 0.5kb upstream 500 false Chr06: 15079024-15079523 Eucalyptus grandis
Eucgr.F01102 0.5kb downstream 0.5kb downstream 5227 true Chr06: 15073797-15079023 Eucalyptus grandis
Eucgr.F01102 0.5kb downstream 0.5kb downstream 500 false Chr06: 15073797-15074296 Eucalyptus grandis
Eucgr.F01102 1.0kb upstream 1.0kb upstream 5727 true Chr06: 15074297-15080023 Eucalyptus grandis
Eucgr.F01102 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15079024-15080023 Eucalyptus grandis
Eucgr.F01102 1.0kb downstream 1.0kb downstream 5727 true Chr06: 15073297-15079023 Eucalyptus grandis
Eucgr.F01102 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15073297-15074296 Eucalyptus grandis
Eucgr.F01102 2.0kb upstream 2.0kb upstream 6727 true Chr06: 15074297-15081023 Eucalyptus grandis
Eucgr.F01102 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15079024-15081023 Eucalyptus grandis
Eucgr.F01102 2.0kb downstream 2.0kb downstream 6727 true Chr06: 15072297-15079023 Eucalyptus grandis
Eucgr.F01102 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15072297-15074296 Eucalyptus grandis
Eucgr.F01102 5.0kb upstream 5.0kb upstream 9727 true Chr06: 15074297-15084023 Eucalyptus grandis
Eucgr.F01102 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15079024-15084023 Eucalyptus grandis
Eucgr.F01102 5.0kb downstream 5.0kb downstream 9727 true Chr06: 15069297-15079023 Eucalyptus grandis
Eucgr.F01102 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15069297-15074296 Eucalyptus grandis
Eucgr.F01102 10.0kb upstream 10.0kb upstream 14727 true Chr06: 15074297-15089023 Eucalyptus grandis
Eucgr.F01102 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15079024-15089023 Eucalyptus grandis
Eucgr.F01102 10.0kb downstream 10.0kb downstream 14727 true Chr06: 15064297-15079023 Eucalyptus grandis
Eucgr.F01102 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15064297-15074296 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041443 5273 Angiosperm View MSA
124063197 5270 Rosid View MSA
123736907 5271 Pentapetalae View MSA
122790897 5272 Eudicot View MSA
121345963 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0237 0.0 24.9816    
cufflinks 26.2431 0.0 68.074   High
cufflinks 8.89561 0.0 24.9988   Low
cufflinks 17.8758 0.0 46.672    
cufflinks 15.7338 0.0 39.2639    
cufflinks 10.2777 0.0 29.1045    

0 Strain