Gene : Eucgr.F01812 E. grandis v2.0
Defline:  (1 of 2) 1.1.1.170 - 3-beta-hydroxysteroid-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) / Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) Genomic Order:  1559
Name:  ? Eucgr.F01812 Secondary Identifier:  ? PAC:32057365
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01812 0.5kb upstream 0.5kb upstream 4354 true Chr06: 24329698-24334051 Eucalyptus grandis
Eucgr.F01812 0.5kb upstream 0.5kb upstream 500 false Chr06: 24329698-24330197 Eucalyptus grandis
Eucgr.F01812 0.5kb downstream 0.5kb downstream 4354 true Chr06: 24330198-24334551 Eucalyptus grandis
Eucgr.F01812 0.5kb downstream 0.5kb downstream 500 false Chr06: 24334052-24334551 Eucalyptus grandis
Eucgr.F01812 1.0kb upstream 1.0kb upstream 4854 true Chr06: 24329198-24334051 Eucalyptus grandis
Eucgr.F01812 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24329198-24330197 Eucalyptus grandis
Eucgr.F01812 1.0kb downstream 1.0kb downstream 4854 true Chr06: 24330198-24335051 Eucalyptus grandis
Eucgr.F01812 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24334052-24335051 Eucalyptus grandis
Eucgr.F01812 2.0kb upstream 2.0kb upstream 5854 true Chr06: 24328198-24334051 Eucalyptus grandis
Eucgr.F01812 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24328198-24330197 Eucalyptus grandis
Eucgr.F01812 2.0kb downstream 2.0kb downstream 5854 true Chr06: 24330198-24336051 Eucalyptus grandis
Eucgr.F01812 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24334052-24336051 Eucalyptus grandis
Eucgr.F01812 5.0kb upstream 5.0kb upstream 8854 true Chr06: 24325198-24334051 Eucalyptus grandis
Eucgr.F01812 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24325198-24330197 Eucalyptus grandis
Eucgr.F01812 5.0kb downstream 5.0kb downstream 8854 true Chr06: 24330198-24339051 Eucalyptus grandis
Eucgr.F01812 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24334052-24339051 Eucalyptus grandis
Eucgr.F01812 10.0kb upstream 10.0kb upstream 13854 true Chr06: 24320198-24334051 Eucalyptus grandis
Eucgr.F01812 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24320198-24330197 Eucalyptus grandis
Eucgr.F01812 10.0kb downstream 10.0kb downstream 13854 true Chr06: 24330198-24344051 Eucalyptus grandis
Eucgr.F01812 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24334052-24344051 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065081 5270 Rosid View MSA
123737236 5271 Pentapetalae View MSA
122787210 5272 Eudicot View MSA
122044697 5273 Angiosperm View MSA
121343909 5274 Embryophyte View MSA
123427810 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8031 0.0 24.6794    
cufflinks 11.1337 0.0 25.3456    
cufflinks 12.4011 0.0 28.0494    
cufflinks 11.2701 0.0 25.5794    
cufflinks 24.416 0.0 54.0435   High
cufflinks 13.3167 0.0 30.0285    

0 Strain