Gene : Eucgr.F01813 E. grandis v2.0
Defline:  (1 of 3) PTHR31500:SF0 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  1560
Name:  ? Eucgr.F01813 Secondary Identifier:  ? PAC:32054499
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01813 0.5kb upstream 0.5kb upstream 6538 true Chr06: 24334096-24340633 Eucalyptus grandis
Eucgr.F01813 0.5kb upstream 0.5kb upstream 500 false Chr06: 24340134-24340633 Eucalyptus grandis
Eucgr.F01813 0.5kb downstream 0.5kb downstream 6538 true Chr06: 24333596-24340133 Eucalyptus grandis
Eucgr.F01813 0.5kb downstream 0.5kb downstream 500 false Chr06: 24333596-24334095 Eucalyptus grandis
Eucgr.F01813 1.0kb upstream 1.0kb upstream 7038 true Chr06: 24334096-24341133 Eucalyptus grandis
Eucgr.F01813 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24340134-24341133 Eucalyptus grandis
Eucgr.F01813 1.0kb downstream 1.0kb downstream 7038 true Chr06: 24333096-24340133 Eucalyptus grandis
Eucgr.F01813 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24333096-24334095 Eucalyptus grandis
Eucgr.F01813 2.0kb upstream 2.0kb upstream 8038 true Chr06: 24334096-24342133 Eucalyptus grandis
Eucgr.F01813 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24340134-24342133 Eucalyptus grandis
Eucgr.F01813 2.0kb downstream 2.0kb downstream 8038 true Chr06: 24332096-24340133 Eucalyptus grandis
Eucgr.F01813 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24332096-24334095 Eucalyptus grandis
Eucgr.F01813 5.0kb upstream 5.0kb upstream 11038 true Chr06: 24334096-24345133 Eucalyptus grandis
Eucgr.F01813 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24340134-24345133 Eucalyptus grandis
Eucgr.F01813 5.0kb downstream 5.0kb downstream 11038 true Chr06: 24329096-24340133 Eucalyptus grandis
Eucgr.F01813 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24329096-24334095 Eucalyptus grandis
Eucgr.F01813 10.0kb upstream 10.0kb upstream 16038 true Chr06: 24334096-24350133 Eucalyptus grandis
Eucgr.F01813 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24340134-24350133 Eucalyptus grandis
Eucgr.F01813 10.0kb downstream 10.0kb downstream 16038 true Chr06: 24324096-24340133 Eucalyptus grandis
Eucgr.F01813 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24324096-24334095 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069070 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.4477 0.0 112.342 High High
cufflinks 27.2207 0.0 61.4228    
cufflinks 47.3112 0.0 116.416 High High
cufflinks 28.3036 0.0 72.4352    
cufflinks 20.8227 0.0 47.1819   Low
cufflinks 29.9574 0.0 67.5004    

0 Strain