Gene : Eucgr.F01800 E. grandis v2.0
Defline:  (1 of 2) PTHR10516:SF319 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC Genomic Order:  1549
Name:  ? Eucgr.F01800 Secondary Identifier:  ? PAC:32054633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01800 0.5kb upstream 0.5kb upstream 2382 true Chr06: 24206271-24208652 Eucalyptus grandis
Eucgr.F01800 0.5kb upstream 0.5kb upstream 500 false Chr06: 24206271-24206770 Eucalyptus grandis
Eucgr.F01800 0.5kb downstream 0.5kb downstream 2382 true Chr06: 24206771-24209152 Eucalyptus grandis
Eucgr.F01800 0.5kb downstream 0.5kb downstream 500 false Chr06: 24208653-24209152 Eucalyptus grandis
Eucgr.F01800 1.0kb upstream 1.0kb upstream 2882 true Chr06: 24205771-24208652 Eucalyptus grandis
Eucgr.F01800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24205771-24206770 Eucalyptus grandis
Eucgr.F01800 1.0kb downstream 1.0kb downstream 2882 true Chr06: 24206771-24209652 Eucalyptus grandis
Eucgr.F01800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24208653-24209652 Eucalyptus grandis
Eucgr.F01800 2.0kb upstream 2.0kb upstream 3882 true Chr06: 24204771-24208652 Eucalyptus grandis
Eucgr.F01800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24204771-24206770 Eucalyptus grandis
Eucgr.F01800 2.0kb downstream 2.0kb downstream 3882 true Chr06: 24206771-24210652 Eucalyptus grandis
Eucgr.F01800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24208653-24210652 Eucalyptus grandis
Eucgr.F01800 5.0kb upstream 5.0kb upstream 6882 true Chr06: 24201771-24208652 Eucalyptus grandis
Eucgr.F01800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24201771-24206770 Eucalyptus grandis
Eucgr.F01800 5.0kb downstream 5.0kb downstream 6882 true Chr06: 24206771-24213652 Eucalyptus grandis
Eucgr.F01800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24208653-24213652 Eucalyptus grandis
Eucgr.F01800 10.0kb upstream 10.0kb upstream 11882 true Chr06: 24196771-24208652 Eucalyptus grandis
Eucgr.F01800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24196771-24206770 Eucalyptus grandis
Eucgr.F01800 10.0kb downstream 10.0kb downstream 11882 true Chr06: 24206771-24218652 Eucalyptus grandis
Eucgr.F01800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24208653-24218652 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060964 5270 Rosid View MSA
123739964 5271 Pentapetalae View MSA
122791539 5272 Eudicot View MSA
122046491 5273 Angiosperm View MSA
121345976 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.2845 0.0 11.7246    
cufflinks 1.01826 0.0 3.27826   Low
cufflinks 4.70396 0.0 12.7672    
cufflinks 1.33889 0.0 4.14882   Low
cufflinks 3.95685 0.0 10.9392    
cufflinks 10.5434 0.0 26.3084   High

0 Strain