Gene : Eucgr.F01802 E. grandis v2.0
Defline:  (1 of 2) PTHR21049 - RIBOPHORIN I Genomic Order:  1551
Name:  ? Eucgr.F01802 Secondary Identifier:  ? PAC:32057131
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01802 0.5kb upstream 0.5kb upstream 5597 true Chr06: 24221482-24227078 Eucalyptus grandis
Eucgr.F01802 0.5kb upstream 0.5kb upstream 500 false Chr06: 24221482-24221981 Eucalyptus grandis
Eucgr.F01802 0.5kb downstream 0.5kb downstream 5597 true Chr06: 24221982-24227578 Eucalyptus grandis
Eucgr.F01802 0.5kb downstream 0.5kb downstream 500 false Chr06: 24227079-24227578 Eucalyptus grandis
Eucgr.F01802 1.0kb upstream 1.0kb upstream 6097 true Chr06: 24220982-24227078 Eucalyptus grandis
Eucgr.F01802 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24220982-24221981 Eucalyptus grandis
Eucgr.F01802 1.0kb downstream 1.0kb downstream 6097 true Chr06: 24221982-24228078 Eucalyptus grandis
Eucgr.F01802 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24227079-24228078 Eucalyptus grandis
Eucgr.F01802 2.0kb upstream 2.0kb upstream 7097 true Chr06: 24219982-24227078 Eucalyptus grandis
Eucgr.F01802 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24219982-24221981 Eucalyptus grandis
Eucgr.F01802 2.0kb downstream 2.0kb downstream 7097 true Chr06: 24221982-24229078 Eucalyptus grandis
Eucgr.F01802 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24227079-24229078 Eucalyptus grandis
Eucgr.F01802 5.0kb upstream 5.0kb upstream 10097 true Chr06: 24216982-24227078 Eucalyptus grandis
Eucgr.F01802 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24216982-24221981 Eucalyptus grandis
Eucgr.F01802 5.0kb downstream 5.0kb downstream 10097 true Chr06: 24221982-24232078 Eucalyptus grandis
Eucgr.F01802 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24227079-24232078 Eucalyptus grandis
Eucgr.F01802 10.0kb upstream 10.0kb upstream 15097 true Chr06: 24211982-24227078 Eucalyptus grandis
Eucgr.F01802 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24211982-24221981 Eucalyptus grandis
Eucgr.F01802 10.0kb downstream 10.0kb downstream 15097 true Chr06: 24221982-24237078 Eucalyptus grandis
Eucgr.F01802 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24227079-24237078 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068967 5270 Rosid View MSA
123737223 5271 Pentapetalae View MSA
122791942 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.4999 0.0 62.2285    
cufflinks 23.1098 0.0 51.9529   Low
cufflinks 27.5569 0.0 68.8881 High  
cufflinks 29.0225 0.0 66.2529    
cufflinks 26.6802 0.0 60.5283    
cufflinks 37.111 0.0 85.5337 High High

0 Strain