Gene : Eucgr.F01786 E. grandis v2.0
Defline:  (1 of 1) KOG0998 - Synaptic vesicle protein EHS-1 and related EH domain proteins Genomic Order:  1536
Name:  ? Eucgr.F01786 Secondary Identifier:  ? PAC:32056169
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01786 0.5kb upstream 0.5kb upstream 10563 true Chr06: 24104084-24114646 Eucalyptus grandis
Eucgr.F01786 0.5kb upstream 0.5kb upstream 500 false Chr06: 24104084-24104583 Eucalyptus grandis
Eucgr.F01786 0.5kb downstream 0.5kb downstream 10563 true Chr06: 24104584-24115146 Eucalyptus grandis
Eucgr.F01786 0.5kb downstream 0.5kb downstream 500 false Chr06: 24114647-24115146 Eucalyptus grandis
Eucgr.F01786 1.0kb upstream 1.0kb upstream 11063 true Chr06: 24103584-24114646 Eucalyptus grandis
Eucgr.F01786 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24103584-24104583 Eucalyptus grandis
Eucgr.F01786 1.0kb downstream 1.0kb downstream 11063 true Chr06: 24104584-24115646 Eucalyptus grandis
Eucgr.F01786 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24114647-24115646 Eucalyptus grandis
Eucgr.F01786 2.0kb upstream 2.0kb upstream 12063 true Chr06: 24102584-24114646 Eucalyptus grandis
Eucgr.F01786 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24102584-24104583 Eucalyptus grandis
Eucgr.F01786 2.0kb downstream 2.0kb downstream 12063 true Chr06: 24104584-24116646 Eucalyptus grandis
Eucgr.F01786 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24114647-24116646 Eucalyptus grandis
Eucgr.F01786 5.0kb upstream 5.0kb upstream 15063 true Chr06: 24099584-24114646 Eucalyptus grandis
Eucgr.F01786 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24099584-24104583 Eucalyptus grandis
Eucgr.F01786 5.0kb downstream 5.0kb downstream 15063 true Chr06: 24104584-24119646 Eucalyptus grandis
Eucgr.F01786 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24114647-24119646 Eucalyptus grandis
Eucgr.F01786 10.0kb upstream 10.0kb upstream 20063 true Chr06: 24094584-24114646 Eucalyptus grandis
Eucgr.F01786 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24094584-24104583 Eucalyptus grandis
Eucgr.F01786 10.0kb downstream 10.0kb downstream 20063 true Chr06: 24104584-24124646 Eucalyptus grandis
Eucgr.F01786 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24114647-24124646 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065520 5270 Rosid View MSA
123746825 5271 Pentapetalae View MSA
122791981 5272 Eudicot View MSA
122047031 5273 Angiosperm View MSA
121346987 5274 Embryophyte View MSA
123426341 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.1174 0.0 45.1916    
cufflinks 21.8412 0.0 57.5537    
cufflinks 17.5352 0.0 48.8005    
cufflinks 29.6338 0.0 84.6424   High
cufflinks 13.6237 0.0 30.6126   Low
cufflinks 21.8473 0.0 54.6291    

0 Strain