Gene : Eucgr.F01793 E. grandis v2.0
Defline:  (1 of 2) 1.2.1.13 - Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) / Triosephosphate dehydrogenase (NADP+) Genomic Order:  1542
Name:  ? Eucgr.F01793 Secondary Identifier:  ? PAC:32056893
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ANAEROFRUCAT-PWY Eucalyptus grandis pathologic  
Egrandis ANAGLYCOLYSIS-PWY Eucalyptus grandis pathologic  
Egrandis CALVIN-PWY Eucalyptus grandis pathologic  
Egrandis GLUCONEO-PWY Eucalyptus grandis pathologic  
Egrandis PHOTOALL-PWY Eucalyptus grandis pathologic  
Egrandis PWY-1042 Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY66-399 Eucalyptus grandis pathologic  
Egrandis SUCSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01793 0.5kb upstream 0.5kb upstream 4062 true Chr06: 24164115-24168176 Eucalyptus grandis
Eucgr.F01793 0.5kb upstream 0.5kb upstream 500 false Chr06: 24167677-24168176 Eucalyptus grandis
Eucgr.F01793 0.5kb downstream 0.5kb downstream 4062 true Chr06: 24163615-24167676 Eucalyptus grandis
Eucgr.F01793 0.5kb downstream 0.5kb downstream 500 false Chr06: 24163615-24164114 Eucalyptus grandis
Eucgr.F01793 1.0kb upstream 1.0kb upstream 4562 true Chr06: 24164115-24168676 Eucalyptus grandis
Eucgr.F01793 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24167677-24168676 Eucalyptus grandis
Eucgr.F01793 1.0kb downstream 1.0kb downstream 4562 true Chr06: 24163115-24167676 Eucalyptus grandis
Eucgr.F01793 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24163115-24164114 Eucalyptus grandis
Eucgr.F01793 2.0kb upstream 2.0kb upstream 5562 true Chr06: 24164115-24169676 Eucalyptus grandis
Eucgr.F01793 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24167677-24169676 Eucalyptus grandis
Eucgr.F01793 2.0kb downstream 2.0kb downstream 5562 true Chr06: 24162115-24167676 Eucalyptus grandis
Eucgr.F01793 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24162115-24164114 Eucalyptus grandis
Eucgr.F01793 5.0kb upstream 5.0kb upstream 8562 true Chr06: 24164115-24172676 Eucalyptus grandis
Eucgr.F01793 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24167677-24172676 Eucalyptus grandis
Eucgr.F01793 5.0kb downstream 5.0kb downstream 8562 true Chr06: 24159115-24167676 Eucalyptus grandis
Eucgr.F01793 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24159115-24164114 Eucalyptus grandis
Eucgr.F01793 10.0kb upstream 10.0kb upstream 13562 true Chr06: 24164115-24177676 Eucalyptus grandis
Eucgr.F01793 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24167677-24177676 Eucalyptus grandis
Eucgr.F01793 10.0kb downstream 10.0kb downstream 13562 true Chr06: 24154115-24167676 Eucalyptus grandis
Eucgr.F01793 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24154115-24164114 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062072 5270 Rosid View MSA
123746514 5271 Pentapetalae View MSA
122796484 5272 Eudicot View MSA
122047323 5273 Angiosperm View MSA
121310728 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 105.253 0.0 244.882 High  
cufflinks 3.0825 0.0 7.92008    
cufflinks 52.891 0.0 118.118 High  
cufflinks 2.27281 0.0 6.01916    
cufflinks 1.8264 0.0 4.93238    
cufflinks 388.367 0.0 1053.08 High High

0 Strain