Gene : Eucgr.F01779 E. grandis v2.0
Defline:  (1 of 2) PTHR32002:SF6 - PROTEIN NLP4-RELATED Genomic Order:  1529
Name:  ? Eucgr.F01779 Secondary Identifier:  ? PAC:32057074
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01779 0.5kb upstream 0.5kb upstream 4476 true Chr06: 24030834-24035309 Eucalyptus grandis
Eucgr.F01779 0.5kb upstream 0.5kb upstream 500 false Chr06: 24030834-24031333 Eucalyptus grandis
Eucgr.F01779 0.5kb downstream 0.5kb downstream 4476 true Chr06: 24031334-24035809 Eucalyptus grandis
Eucgr.F01779 0.5kb downstream 0.5kb downstream 500 false Chr06: 24035310-24035809 Eucalyptus grandis
Eucgr.F01779 1.0kb upstream 1.0kb upstream 4976 true Chr06: 24030334-24035309 Eucalyptus grandis
Eucgr.F01779 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24030334-24031333 Eucalyptus grandis
Eucgr.F01779 1.0kb downstream 1.0kb downstream 4976 true Chr06: 24031334-24036309 Eucalyptus grandis
Eucgr.F01779 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24035310-24036309 Eucalyptus grandis
Eucgr.F01779 2.0kb upstream 2.0kb upstream 5976 true Chr06: 24029334-24035309 Eucalyptus grandis
Eucgr.F01779 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24029334-24031333 Eucalyptus grandis
Eucgr.F01779 2.0kb downstream 2.0kb downstream 5976 true Chr06: 24031334-24037309 Eucalyptus grandis
Eucgr.F01779 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24035310-24037309 Eucalyptus grandis
Eucgr.F01779 5.0kb upstream 5.0kb upstream 8976 true Chr06: 24026334-24035309 Eucalyptus grandis
Eucgr.F01779 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24026334-24031333 Eucalyptus grandis
Eucgr.F01779 5.0kb downstream 5.0kb downstream 8976 true Chr06: 24031334-24040309 Eucalyptus grandis
Eucgr.F01779 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24035310-24040309 Eucalyptus grandis
Eucgr.F01779 10.0kb upstream 10.0kb upstream 13976 true Chr06: 24021334-24035309 Eucalyptus grandis
Eucgr.F01779 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24021334-24031333 Eucalyptus grandis
Eucgr.F01779 10.0kb downstream 10.0kb downstream 13976 true Chr06: 24031334-24045309 Eucalyptus grandis
Eucgr.F01779 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24035310-24045309 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068649 5270 Rosid View MSA
123748855 5271 Pentapetalae View MSA
122793045 5272 Eudicot View MSA
122051349 5273 Angiosperm View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.82083 0.0 5.06156    
cufflinks 0.545717 0.0 1.87496 Low  
cufflinks 1.72589 0.0 5.31128    
cufflinks 0.414899 0.0 1.44904 Low Low
cufflinks 3.24832 0.0 8.15    
cufflinks 8.03309 0.0 19.2359   High

0 Strain