Gene : Eucgr.F01771 E. grandis v2.0
Defline:  (1 of 2) PTHR12780 - RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED Genomic Order:  1521
Name:  ? Eucgr.F01771 Secondary Identifier:  ? PAC:32054471
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01771 0.5kb upstream 0.5kb upstream 2708 true Chr06: 23908267-23910974 Eucalyptus grandis
Eucgr.F01771 0.5kb upstream 0.5kb upstream 500 false Chr06: 23910475-23910974 Eucalyptus grandis
Eucgr.F01771 0.5kb downstream 0.5kb downstream 2708 true Chr06: 23907767-23910474 Eucalyptus grandis
Eucgr.F01771 0.5kb downstream 0.5kb downstream 500 false Chr06: 23907767-23908266 Eucalyptus grandis
Eucgr.F01771 1.0kb upstream 1.0kb upstream 3208 true Chr06: 23908267-23911474 Eucalyptus grandis
Eucgr.F01771 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23910475-23911474 Eucalyptus grandis
Eucgr.F01771 1.0kb downstream 1.0kb downstream 3208 true Chr06: 23907267-23910474 Eucalyptus grandis
Eucgr.F01771 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23907267-23908266 Eucalyptus grandis
Eucgr.F01771 2.0kb upstream 2.0kb upstream 4208 true Chr06: 23908267-23912474 Eucalyptus grandis
Eucgr.F01771 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23910475-23912474 Eucalyptus grandis
Eucgr.F01771 2.0kb downstream 2.0kb downstream 4208 true Chr06: 23906267-23910474 Eucalyptus grandis
Eucgr.F01771 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23906267-23908266 Eucalyptus grandis
Eucgr.F01771 5.0kb upstream 5.0kb upstream 7208 true Chr06: 23908267-23915474 Eucalyptus grandis
Eucgr.F01771 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23910475-23915474 Eucalyptus grandis
Eucgr.F01771 5.0kb downstream 5.0kb downstream 7208 true Chr06: 23903267-23910474 Eucalyptus grandis
Eucgr.F01771 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23903267-23908266 Eucalyptus grandis
Eucgr.F01771 10.0kb upstream 10.0kb upstream 12208 true Chr06: 23908267-23920474 Eucalyptus grandis
Eucgr.F01771 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23910475-23920474 Eucalyptus grandis
Eucgr.F01771 10.0kb downstream 10.0kb downstream 12208 true Chr06: 23898267-23910474 Eucalyptus grandis
Eucgr.F01771 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23898267-23908266 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066352 5270 Rosid View MSA
123744384 5271 Pentapetalae View MSA
122788690 5272 Eudicot View MSA
122046766 5273 Angiosperm View MSA
121344415 5274 Embryophyte View MSA
123425900 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.84658 0.0 10.1832    
cufflinks 3.99376 0.0 10.553    
cufflinks 6.60546 0.0 16.6009    
cufflinks 3.28528 0.0 8.8475   Low
cufflinks 5.16459 0.0 13.3481    
cufflinks 11.079 0.0 26.3786   High

0 Strain