Gene : Eucgr.F01711 E. grandis v2.0
Defline:  (1 of 2) PTHR11353:SF23 - T-COMPLEX PROTEIN 1 SUBUNIT BETA Genomic Order:  1471
Name:  ? Eucgr.F01711 Secondary Identifier:  ? PAC:32053964
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01711 0.5kb upstream 0.5kb upstream 6239 true Chr06: 22766293-22772531 Eucalyptus grandis
Eucgr.F01711 0.5kb upstream 0.5kb upstream 500 false Chr06: 22772032-22772531 Eucalyptus grandis
Eucgr.F01711 0.5kb downstream 0.5kb downstream 6239 true Chr06: 22765793-22772031 Eucalyptus grandis
Eucgr.F01711 0.5kb downstream 0.5kb downstream 500 false Chr06: 22765793-22766292 Eucalyptus grandis
Eucgr.F01711 1.0kb upstream 1.0kb upstream 6739 true Chr06: 22766293-22773031 Eucalyptus grandis
Eucgr.F01711 1.0kb upstream 1.0kb upstream 1000 false Chr06: 22772032-22773031 Eucalyptus grandis
Eucgr.F01711 1.0kb downstream 1.0kb downstream 6739 true Chr06: 22765293-22772031 Eucalyptus grandis
Eucgr.F01711 1.0kb downstream 1.0kb downstream 1000 false Chr06: 22765293-22766292 Eucalyptus grandis
Eucgr.F01711 2.0kb upstream 2.0kb upstream 7739 true Chr06: 22766293-22774031 Eucalyptus grandis
Eucgr.F01711 2.0kb upstream 2.0kb upstream 2000 false Chr06: 22772032-22774031 Eucalyptus grandis
Eucgr.F01711 2.0kb downstream 2.0kb downstream 7739 true Chr06: 22764293-22772031 Eucalyptus grandis
Eucgr.F01711 2.0kb downstream 2.0kb downstream 2000 false Chr06: 22764293-22766292 Eucalyptus grandis
Eucgr.F01711 5.0kb upstream 5.0kb upstream 10739 true Chr06: 22766293-22777031 Eucalyptus grandis
Eucgr.F01711 5.0kb upstream 5.0kb upstream 5000 false Chr06: 22772032-22777031 Eucalyptus grandis
Eucgr.F01711 5.0kb downstream 5.0kb downstream 10739 true Chr06: 22761293-22772031 Eucalyptus grandis
Eucgr.F01711 5.0kb downstream 5.0kb downstream 5000 false Chr06: 22761293-22766292 Eucalyptus grandis
Eucgr.F01711 10.0kb upstream 10.0kb upstream 15739 true Chr06: 22766293-22782031 Eucalyptus grandis
Eucgr.F01711 10.0kb upstream 10.0kb upstream 10000 false Chr06: 22772032-22782031 Eucalyptus grandis
Eucgr.F01711 10.0kb downstream 10.0kb downstream 15739 true Chr06: 22756293-22772031 Eucalyptus grandis
Eucgr.F01711 10.0kb downstream 10.0kb downstream 10000 false Chr06: 22756293-22766292 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064073 5270 Rosid View MSA
123747286 5271 Pentapetalae View MSA
122790745 5272 Eudicot View MSA
122042218 5273 Angiosperm View MSA
121346616 5274 Embryophyte View MSA
123426772 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.27299 0.0 14.5155   Low
cufflinks 68.2874 0.0 158.596 High  
cufflinks 14.9789 0.0 33.1962    
cufflinks 66.2919 0.0 154.161 High  
cufflinks 105.062 0.0 253.541 High High
cufflinks 4.67633 0.0 11.1342   Low

0 Strain