Gene : Eucgr.F01638 E. grandis v2.0
Defline:  (1 of 2) PTHR12341 - 5'->3' EXORIBONUCLEASE Genomic Order:  1408
Name:  ? Eucgr.F01638 Secondary Identifier:  ? PAC:32052903
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01638 0.5kb upstream 0.5kb upstream 13196 true Chr06: 21696085-21709280 Eucalyptus grandis
Eucgr.F01638 0.5kb upstream 0.5kb upstream 500 false Chr06: 21696085-21696584 Eucalyptus grandis
Eucgr.F01638 0.5kb downstream 0.5kb downstream 13196 true Chr06: 21696585-21709780 Eucalyptus grandis
Eucgr.F01638 0.5kb downstream 0.5kb downstream 500 false Chr06: 21709281-21709780 Eucalyptus grandis
Eucgr.F01638 1.0kb upstream 1.0kb upstream 13696 true Chr06: 21695585-21709280 Eucalyptus grandis
Eucgr.F01638 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21695585-21696584 Eucalyptus grandis
Eucgr.F01638 1.0kb downstream 1.0kb downstream 13696 true Chr06: 21696585-21710280 Eucalyptus grandis
Eucgr.F01638 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21709281-21710280 Eucalyptus grandis
Eucgr.F01638 2.0kb upstream 2.0kb upstream 14696 true Chr06: 21694585-21709280 Eucalyptus grandis
Eucgr.F01638 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21694585-21696584 Eucalyptus grandis
Eucgr.F01638 2.0kb downstream 2.0kb downstream 14696 true Chr06: 21696585-21711280 Eucalyptus grandis
Eucgr.F01638 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21709281-21711280 Eucalyptus grandis
Eucgr.F01638 5.0kb upstream 5.0kb upstream 17696 true Chr06: 21691585-21709280 Eucalyptus grandis
Eucgr.F01638 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21691585-21696584 Eucalyptus grandis
Eucgr.F01638 5.0kb downstream 5.0kb downstream 17696 true Chr06: 21696585-21714280 Eucalyptus grandis
Eucgr.F01638 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21709281-21714280 Eucalyptus grandis
Eucgr.F01638 10.0kb upstream 10.0kb upstream 22696 true Chr06: 21686585-21709280 Eucalyptus grandis
Eucgr.F01638 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21686585-21696584 Eucalyptus grandis
Eucgr.F01638 10.0kb downstream 10.0kb downstream 22696 true Chr06: 21696585-21719280 Eucalyptus grandis
Eucgr.F01638 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21709281-21719280 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026403 5273 Angiosperm View MSA
124066178 5270 Rosid View MSA
123742031 5271 Pentapetalae View MSA
122789000 5272 Eudicot View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9756 0.0 24.28    
cufflinks 7.54259 0.0 16.7694   Low
cufflinks 12.605 0.0 27.8794    
cufflinks 9.31501 0.0 20.6216    
cufflinks 8.62302 0.0 19.1247    
cufflinks 14.5567 0.0 32.2099   High

0 Strain