Gene : Eucgr.F01610 E. grandis v2.0
Defline:  (1 of 7) 5.4.99.28 - tRNA pseudouridine(32) synthase / Pseudouridine synthase RluA Genomic Order:  1382
Name:  ? Eucgr.F01610 Secondary Identifier:  ? PAC:32054243
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01610 0.5kb upstream 0.5kb upstream 5220 true Chr06: 21371752-21376971 Eucalyptus grandis
Eucgr.F01610 0.5kb upstream 0.5kb upstream 500 false Chr06: 21376472-21376971 Eucalyptus grandis
Eucgr.F01610 0.5kb downstream 0.5kb downstream 5220 true Chr06: 21371252-21376471 Eucalyptus grandis
Eucgr.F01610 0.5kb downstream 0.5kb downstream 500 false Chr06: 21371252-21371751 Eucalyptus grandis
Eucgr.F01610 1.0kb upstream 1.0kb upstream 5720 true Chr06: 21371752-21377471 Eucalyptus grandis
Eucgr.F01610 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21376472-21377471 Eucalyptus grandis
Eucgr.F01610 1.0kb downstream 1.0kb downstream 5720 true Chr06: 21370752-21376471 Eucalyptus grandis
Eucgr.F01610 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21370752-21371751 Eucalyptus grandis
Eucgr.F01610 2.0kb upstream 2.0kb upstream 6720 true Chr06: 21371752-21378471 Eucalyptus grandis
Eucgr.F01610 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21376472-21378471 Eucalyptus grandis
Eucgr.F01610 2.0kb downstream 2.0kb downstream 6720 true Chr06: 21369752-21376471 Eucalyptus grandis
Eucgr.F01610 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21369752-21371751 Eucalyptus grandis
Eucgr.F01610 5.0kb upstream 5.0kb upstream 9720 true Chr06: 21371752-21381471 Eucalyptus grandis
Eucgr.F01610 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21376472-21381471 Eucalyptus grandis
Eucgr.F01610 5.0kb downstream 5.0kb downstream 9720 true Chr06: 21366752-21376471 Eucalyptus grandis
Eucgr.F01610 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21366752-21371751 Eucalyptus grandis
Eucgr.F01610 10.0kb upstream 10.0kb upstream 14720 true Chr06: 21371752-21386471 Eucalyptus grandis
Eucgr.F01610 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21376472-21386471 Eucalyptus grandis
Eucgr.F01610 10.0kb downstream 10.0kb downstream 14720 true Chr06: 21361752-21376471 Eucalyptus grandis
Eucgr.F01610 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21361752-21371751 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064384 5270 Rosid View MSA
123747081 5271 Pentapetalae View MSA
122790288 5272 Eudicot View MSA
122047695 5273 Angiosperm View MSA
121349064 5274 Embryophyte View MSA
123426945 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.15836 0.0 20.0815    
cufflinks 0.692792 0.0 2.24164   Low
cufflinks 6.10351 0.0 15.5529    
cufflinks 2.86622 0.0 7.85989    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain