Gene : Eucgr.F01596 E. grandis v2.0
Defline:  (1 of 1) PTHR15160:SF3 - BIFUNCTIONAL NUCLEASE 1-RELATED Genomic Order:  1369
Name:  ? Eucgr.F01596 Secondary Identifier:  ? PAC:32057679
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01596 0.5kb upstream 0.5kb upstream 4279 true Chr06: 21179722-21184000 Eucalyptus grandis
Eucgr.F01596 0.5kb upstream 0.5kb upstream 500 false Chr06: 21183501-21184000 Eucalyptus grandis
Eucgr.F01596 0.5kb downstream 0.5kb downstream 4279 true Chr06: 21179222-21183500 Eucalyptus grandis
Eucgr.F01596 0.5kb downstream 0.5kb downstream 500 false Chr06: 21179222-21179721 Eucalyptus grandis
Eucgr.F01596 1.0kb upstream 1.0kb upstream 4779 true Chr06: 21179722-21184500 Eucalyptus grandis
Eucgr.F01596 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21183501-21184500 Eucalyptus grandis
Eucgr.F01596 1.0kb downstream 1.0kb downstream 4779 true Chr06: 21178722-21183500 Eucalyptus grandis
Eucgr.F01596 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21178722-21179721 Eucalyptus grandis
Eucgr.F01596 2.0kb upstream 2.0kb upstream 5779 true Chr06: 21179722-21185500 Eucalyptus grandis
Eucgr.F01596 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21183501-21185500 Eucalyptus grandis
Eucgr.F01596 2.0kb downstream 2.0kb downstream 5779 true Chr06: 21177722-21183500 Eucalyptus grandis
Eucgr.F01596 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21177722-21179721 Eucalyptus grandis
Eucgr.F01596 5.0kb upstream 5.0kb upstream 8779 true Chr06: 21179722-21188500 Eucalyptus grandis
Eucgr.F01596 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21183501-21188500 Eucalyptus grandis
Eucgr.F01596 5.0kb downstream 5.0kb downstream 8779 true Chr06: 21174722-21183500 Eucalyptus grandis
Eucgr.F01596 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21174722-21179721 Eucalyptus grandis
Eucgr.F01596 10.0kb upstream 10.0kb upstream 13779 true Chr06: 21179722-21193500 Eucalyptus grandis
Eucgr.F01596 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21183501-21193500 Eucalyptus grandis
Eucgr.F01596 10.0kb downstream 10.0kb downstream 13779 true Chr06: 21169722-21183500 Eucalyptus grandis
Eucgr.F01596 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21169722-21179721 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063334 5270 Rosid View MSA
123751879 5271 Pentapetalae View MSA
122794039 5272 Eudicot View MSA
122042536 5273 Angiosperm View MSA
121348555 5274 Embryophyte View MSA
123425976 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.4252 0.0 63.1297 High  
cufflinks 35.6391 0.0 78.831    
cufflinks 15.004 0.0 34.2168    
cufflinks 13.9257 0.0 31.7944    
cufflinks 4.8787 0.0 12.3061   Low
cufflinks 131.193 0.0 301.312 High High

0 Strain