Gene : Eucgr.F01530 E. grandis v2.0
Defline:  (1 of 2) PTHR10891:SF568 - CALCIUM-BINDING PROTEIN CML41-RELATED Genomic Order:  1305
Name:  ? Eucgr.F01530 Secondary Identifier:  ? PAC:32055104
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F01530 0.5kb upstream 0.5kb upstream 1315 true Chr06: 20559797-20561111 Eucalyptus grandis
Eucgr.F01530 0.5kb upstream 0.5kb upstream 500 false Chr06: 20560612-20561111 Eucalyptus grandis
Eucgr.F01530 0.5kb downstream 0.5kb downstream 1315 true Chr06: 20559297-20560611 Eucalyptus grandis
Eucgr.F01530 0.5kb downstream 0.5kb downstream 500 false Chr06: 20559297-20559796 Eucalyptus grandis
Eucgr.F01530 1.0kb upstream 1.0kb upstream 1815 true Chr06: 20559797-20561611 Eucalyptus grandis
Eucgr.F01530 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20560612-20561611 Eucalyptus grandis
Eucgr.F01530 1.0kb downstream 1.0kb downstream 1815 true Chr06: 20558797-20560611 Eucalyptus grandis
Eucgr.F01530 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20558797-20559796 Eucalyptus grandis
Eucgr.F01530 2.0kb upstream 2.0kb upstream 2815 true Chr06: 20559797-20562611 Eucalyptus grandis
Eucgr.F01530 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20560612-20562611 Eucalyptus grandis
Eucgr.F01530 2.0kb downstream 2.0kb downstream 2815 true Chr06: 20557797-20560611 Eucalyptus grandis
Eucgr.F01530 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20557797-20559796 Eucalyptus grandis
Eucgr.F01530 5.0kb upstream 5.0kb upstream 5815 true Chr06: 20559797-20565611 Eucalyptus grandis
Eucgr.F01530 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20560612-20565611 Eucalyptus grandis
Eucgr.F01530 5.0kb downstream 5.0kb downstream 5815 true Chr06: 20554797-20560611 Eucalyptus grandis
Eucgr.F01530 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20554797-20559796 Eucalyptus grandis
Eucgr.F01530 10.0kb upstream 10.0kb upstream 10815 true Chr06: 20559797-20570611 Eucalyptus grandis
Eucgr.F01530 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20560612-20570611 Eucalyptus grandis
Eucgr.F01530 10.0kb downstream 10.0kb downstream 10815 true Chr06: 20549797-20560611 Eucalyptus grandis
Eucgr.F01530 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20549797-20559796 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072795 5270 Rosid View MSA
123737357 5271 Pentapetalae View MSA
122787058 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.1503 0.0 13.8791   Low
cufflinks 44.9343 0.0 100.832 High  
cufflinks 9.88824 0.0 25.2038    
cufflinks 167.6 0.0 375.055 High High
cufflinks 55.924 0.0 124.494 High  
cufflinks 15.1172 0.0 36.4243    

0 Strain