Gene : Eucgr.F02251 E. grandis v2.0
Defline:  (1 of 1) PF15811 - Small VCP/p97-interacting protein (SVIP) Genomic Order:  1939
Name:  ? Eucgr.F02251 Secondary Identifier:  ? PAC:32055865
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02251 0.5kb upstream 0.5kb upstream 2480 true Chr06: 32804618-32807097 Eucalyptus grandis
Eucgr.F02251 0.5kb upstream 0.5kb upstream 500 false Chr06: 32806598-32807097 Eucalyptus grandis
Eucgr.F02251 0.5kb downstream 0.5kb downstream 2480 true Chr06: 32804118-32806597 Eucalyptus grandis
Eucgr.F02251 0.5kb downstream 0.5kb downstream 500 false Chr06: 32804118-32804617 Eucalyptus grandis
Eucgr.F02251 1.0kb upstream 1.0kb upstream 2980 true Chr06: 32804618-32807597 Eucalyptus grandis
Eucgr.F02251 1.0kb upstream 1.0kb upstream 1000 false Chr06: 32806598-32807597 Eucalyptus grandis
Eucgr.F02251 1.0kb downstream 1.0kb downstream 2980 true Chr06: 32803618-32806597 Eucalyptus grandis
Eucgr.F02251 1.0kb downstream 1.0kb downstream 1000 false Chr06: 32803618-32804617 Eucalyptus grandis
Eucgr.F02251 2.0kb upstream 2.0kb upstream 3980 true Chr06: 32804618-32808597 Eucalyptus grandis
Eucgr.F02251 2.0kb upstream 2.0kb upstream 2000 false Chr06: 32806598-32808597 Eucalyptus grandis
Eucgr.F02251 2.0kb downstream 2.0kb downstream 3980 true Chr06: 32802618-32806597 Eucalyptus grandis
Eucgr.F02251 2.0kb downstream 2.0kb downstream 2000 false Chr06: 32802618-32804617 Eucalyptus grandis
Eucgr.F02251 5.0kb upstream 5.0kb upstream 6980 true Chr06: 32804618-32811597 Eucalyptus grandis
Eucgr.F02251 5.0kb upstream 5.0kb upstream 5000 false Chr06: 32806598-32811597 Eucalyptus grandis
Eucgr.F02251 5.0kb downstream 5.0kb downstream 6980 true Chr06: 32799618-32806597 Eucalyptus grandis
Eucgr.F02251 5.0kb downstream 5.0kb downstream 5000 false Chr06: 32799618-32804617 Eucalyptus grandis
Eucgr.F02251 10.0kb upstream 10.0kb upstream 11980 true Chr06: 32804618-32816597 Eucalyptus grandis
Eucgr.F02251 10.0kb upstream 10.0kb upstream 10000 false Chr06: 32806598-32816597 Eucalyptus grandis
Eucgr.F02251 10.0kb downstream 10.0kb downstream 11980 true Chr06: 32794618-32806597 Eucalyptus grandis
Eucgr.F02251 10.0kb downstream 10.0kb downstream 10000 false Chr06: 32794618-32804617 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072896 5270 Rosid View MSA
123736483 5271 Pentapetalae View MSA
122789828 5272 Eudicot View MSA
122050042 5273 Angiosperm View MSA
121311703 5274 Embryophyte View MSA
123348966 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.901 0.0 110.32 High  
cufflinks 96.5136 0.0 213.466 High  
cufflinks 45.6571 0.0 103.632 High  
cufflinks 83.2017 0.0 184.271 High  
cufflinks 175.527 0.0 391.185 High High
cufflinks 28.4548 0.0 66.7667   Low

0 Strain