Gene : Eucgr.F02269 E. grandis v2.0
Defline:  (1 of 2) PTHR23201//PTHR23201:SF4 - EXTENSIN, PROLINE-RICH PROTEIN Genomic Order:  1921
Name:  ? Eucgr.F02269 Secondary Identifier:  ? PAC:32054928
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02269 0.5kb upstream 0.5kb upstream 1307 true Chr06: 32526931-32528237 Eucalyptus grandis
Eucgr.F02269 0.5kb upstream 0.5kb upstream 500 false Chr06: 32527738-32528237 Eucalyptus grandis
Eucgr.F02269 0.5kb downstream 0.5kb downstream 1307 true Chr06: 32526431-32527737 Eucalyptus grandis
Eucgr.F02269 0.5kb downstream 0.5kb downstream 500 false Chr06: 32526431-32526930 Eucalyptus grandis
Eucgr.F02269 1.0kb upstream 1.0kb upstream 1807 true Chr06: 32526931-32528737 Eucalyptus grandis
Eucgr.F02269 1.0kb upstream 1.0kb upstream 1000 false Chr06: 32527738-32528737 Eucalyptus grandis
Eucgr.F02269 1.0kb downstream 1.0kb downstream 1807 true Chr06: 32525931-32527737 Eucalyptus grandis
Eucgr.F02269 1.0kb downstream 1.0kb downstream 1000 false Chr06: 32525931-32526930 Eucalyptus grandis
Eucgr.F02269 2.0kb upstream 2.0kb upstream 2807 true Chr06: 32526931-32529737 Eucalyptus grandis
Eucgr.F02269 2.0kb upstream 2.0kb upstream 2000 false Chr06: 32527738-32529737 Eucalyptus grandis
Eucgr.F02269 2.0kb downstream 2.0kb downstream 2807 true Chr06: 32524931-32527737 Eucalyptus grandis
Eucgr.F02269 2.0kb downstream 2.0kb downstream 2000 false Chr06: 32524931-32526930 Eucalyptus grandis
Eucgr.F02269 5.0kb upstream 5.0kb upstream 5807 true Chr06: 32526931-32532737 Eucalyptus grandis
Eucgr.F02269 5.0kb upstream 5.0kb upstream 5000 false Chr06: 32527738-32532737 Eucalyptus grandis
Eucgr.F02269 5.0kb downstream 5.0kb downstream 5807 true Chr06: 32521931-32527737 Eucalyptus grandis
Eucgr.F02269 5.0kb downstream 5.0kb downstream 5000 false Chr06: 32521931-32526930 Eucalyptus grandis
Eucgr.F02269 10.0kb upstream 10.0kb upstream 10807 true Chr06: 32526931-32537737 Eucalyptus grandis
Eucgr.F02269 10.0kb upstream 10.0kb upstream 10000 false Chr06: 32527738-32537737 Eucalyptus grandis
Eucgr.F02269 10.0kb downstream 10.0kb downstream 10807 true Chr06: 32516931-32527737 Eucalyptus grandis
Eucgr.F02269 10.0kb downstream 10.0kb downstream 10000 false Chr06: 32516931-32526930 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074083 5270 Rosid View MSA
123750435 5271 Pentapetalae View MSA
122791253 5272 Eudicot View MSA
122044591 5273 Angiosperm View MSA
121310316 5274 Embryophyte View MSA
123347833 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.0929 0.0 132.297 High  
cufflinks 2.73489 0.0 8.09323   Low
cufflinks 33.3288 0.0 77.635 High  
cufflinks 10.7846 0.0 28.0398    
cufflinks 71.5733 0.0 159.397 High  
cufflinks 107.092 0.0 236.835 High  

0 Strain