Gene : Eucgr.F02258 E. grandis v2.0
Defline:  (1 of 2) PTHR21494 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 Genomic Order:  1932
Name:  ? Eucgr.F02258 Secondary Identifier:  ? PAC:32053200
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02258 0.5kb upstream 0.5kb upstream 9285 true Chr06: 32690979-32700263 Eucalyptus grandis
Eucgr.F02258 0.5kb upstream 0.5kb upstream 500 false Chr06: 32690979-32691478 Eucalyptus grandis
Eucgr.F02258 0.5kb downstream 0.5kb downstream 9285 true Chr06: 32691479-32700763 Eucalyptus grandis
Eucgr.F02258 0.5kb downstream 0.5kb downstream 500 false Chr06: 32700264-32700763 Eucalyptus grandis
Eucgr.F02258 1.0kb upstream 1.0kb upstream 9785 true Chr06: 32690479-32700263 Eucalyptus grandis
Eucgr.F02258 1.0kb upstream 1.0kb upstream 1000 false Chr06: 32690479-32691478 Eucalyptus grandis
Eucgr.F02258 1.0kb downstream 1.0kb downstream 9785 true Chr06: 32691479-32701263 Eucalyptus grandis
Eucgr.F02258 1.0kb downstream 1.0kb downstream 1000 false Chr06: 32700264-32701263 Eucalyptus grandis
Eucgr.F02258 2.0kb upstream 2.0kb upstream 10785 true Chr06: 32689479-32700263 Eucalyptus grandis
Eucgr.F02258 2.0kb upstream 2.0kb upstream 2000 false Chr06: 32689479-32691478 Eucalyptus grandis
Eucgr.F02258 2.0kb downstream 2.0kb downstream 10785 true Chr06: 32691479-32702263 Eucalyptus grandis
Eucgr.F02258 2.0kb downstream 2.0kb downstream 2000 false Chr06: 32700264-32702263 Eucalyptus grandis
Eucgr.F02258 5.0kb upstream 5.0kb upstream 13785 true Chr06: 32686479-32700263 Eucalyptus grandis
Eucgr.F02258 5.0kb upstream 5.0kb upstream 5000 false Chr06: 32686479-32691478 Eucalyptus grandis
Eucgr.F02258 5.0kb downstream 5.0kb downstream 13785 true Chr06: 32691479-32705263 Eucalyptus grandis
Eucgr.F02258 5.0kb downstream 5.0kb downstream 5000 false Chr06: 32700264-32705263 Eucalyptus grandis
Eucgr.F02258 10.0kb upstream 10.0kb upstream 18785 true Chr06: 32681479-32700263 Eucalyptus grandis
Eucgr.F02258 10.0kb upstream 10.0kb upstream 10000 false Chr06: 32681479-32691478 Eucalyptus grandis
Eucgr.F02258 10.0kb downstream 10.0kb downstream 18785 true Chr06: 32691479-32710263 Eucalyptus grandis
Eucgr.F02258 10.0kb downstream 10.0kb downstream 10000 false Chr06: 32700264-32710263 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069549 5270 Rosid View MSA
123741319 5271 Pentapetalae View MSA
122794121 5272 Eudicot View MSA
122043099 5273 Angiosperm View MSA
121349744 5274 Embryophyte View MSA
123381424 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.93294 0.0 18.1768    
cufflinks 6.71738 0.0 16.6005    
cufflinks 8.57209 0.0 19.2729    
cufflinks 8.31328 0.0 21.6649    
cufflinks 4.29405 0.0 9.8545   Low
cufflinks 7.21816 0.0 20.0159    

0 Strain