Gene : Eucgr.F02235 E. grandis v2.0
Defline:  (1 of 1) PTHR10516//PTHR10516:SF299 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  1955
Name:  ? Eucgr.F02235 Secondary Identifier:  ? PAC:32054847
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F02235 0.5kb upstream 0.5kb upstream 7052 true Chr06: 32995207-33002258 Eucalyptus grandis
Eucgr.F02235 0.5kb upstream 0.5kb upstream 500 false Chr06: 33001759-33002258 Eucalyptus grandis
Eucgr.F02235 0.5kb downstream 0.5kb downstream 7052 true Chr06: 32994707-33001758 Eucalyptus grandis
Eucgr.F02235 0.5kb downstream 0.5kb downstream 500 false Chr06: 32994707-32995206 Eucalyptus grandis
Eucgr.F02235 1.0kb upstream 1.0kb upstream 7552 true Chr06: 32995207-33002758 Eucalyptus grandis
Eucgr.F02235 1.0kb upstream 1.0kb upstream 1000 false Chr06: 33001759-33002758 Eucalyptus grandis
Eucgr.F02235 1.0kb downstream 1.0kb downstream 7552 true Chr06: 32994207-33001758 Eucalyptus grandis
Eucgr.F02235 1.0kb downstream 1.0kb downstream 1000 false Chr06: 32994207-32995206 Eucalyptus grandis
Eucgr.F02235 2.0kb upstream 2.0kb upstream 8552 true Chr06: 32995207-33003758 Eucalyptus grandis
Eucgr.F02235 2.0kb upstream 2.0kb upstream 2000 false Chr06: 33001759-33003758 Eucalyptus grandis
Eucgr.F02235 2.0kb downstream 2.0kb downstream 8552 true Chr06: 32993207-33001758 Eucalyptus grandis
Eucgr.F02235 2.0kb downstream 2.0kb downstream 2000 false Chr06: 32993207-32995206 Eucalyptus grandis
Eucgr.F02235 5.0kb upstream 5.0kb upstream 11552 true Chr06: 32995207-33006758 Eucalyptus grandis
Eucgr.F02235 5.0kb upstream 5.0kb upstream 5000 false Chr06: 33001759-33006758 Eucalyptus grandis
Eucgr.F02235 5.0kb downstream 5.0kb downstream 11552 true Chr06: 32990207-33001758 Eucalyptus grandis
Eucgr.F02235 5.0kb downstream 5.0kb downstream 5000 false Chr06: 32990207-32995206 Eucalyptus grandis
Eucgr.F02235 10.0kb upstream 10.0kb upstream 16552 true Chr06: 32995207-33011758 Eucalyptus grandis
Eucgr.F02235 10.0kb upstream 10.0kb upstream 10000 false Chr06: 33001759-33011758 Eucalyptus grandis
Eucgr.F02235 10.0kb downstream 10.0kb downstream 16552 true Chr06: 32985207-33001758 Eucalyptus grandis
Eucgr.F02235 10.0kb downstream 10.0kb downstream 10000 false Chr06: 32985207-32995206 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067136 5270 Rosid View MSA
123746363 5271 Pentapetalae View MSA
122792796 5272 Eudicot View MSA
122047440 5273 Angiosperm View MSA
121347490 5274 Embryophyte View MSA
123426312 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.93803 0.0 15.7597    
cufflinks 13.401 0.0 29.68   High
cufflinks 7.76792 0.0 17.4958    
cufflinks 12.1524 0.0 26.9379    
cufflinks 10.4156 0.0 23.206    
cufflinks 4.9297 0.0 11.519   Low

0 Strain